DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and XIJ

DIOPT Version :9

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_001319790.1 Gene:XIJ / 824985 AraportID:AT3G58160 Length:1242 Species:Arabidopsis thaliana


Alignment Length:1347 Identity:418/1347 - (31%)
Similarity:653/1347 - (48%) Gaps:234/1347 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 VWVPHENQGFVAASIKREHGDEVEVELAETGKRVMILRDDIQKMNPPKFDK----VEDMAELTCL 142
            |||....:.::...:....|:|.|:: ...|:.|:.   ::.::.|...:.    ||||..|:.|
plant    11 VWVEDPERAWIDGVVLNIKGEEAEIK-TNDGRDVIA---N
LSRLYPKDTEAPSEGVEDMTRLSYL 71

  Fly   143 NEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLP-IYTEKIMERYKGIKRHEVPPHVFAITDS 206
            :|.:||.|:..||....||||:|...:.|||::.|| :|..::||:||.....|:.||||||...
plant    72 HEPAVLDNLATRYELNEIYTYTGNILIAVNPFQGLPHLYDAEVMEKYKEAYFKELNPHVFAIGGI 136

  Fly   207 AYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLINFSVNTNKY 271
            |||.|:.:..::.||.:||||:||||.||.::::|||...          |.||           
plant   137 AYREMINEGRNKCILVSGESGSGKTETTKMLMRYLAYFGG----------HTAV----------- 180

  Fly   272 IKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGE-LEQQLLQANPILEAFGNAKTVKNDNSSRFGK 335
                                          ||. :|.|:|::||:||||||||||||:|||||||
plant   181 ------------------------------EGRTVENQVLESNPVLEAFGNAKTVKNNNSSRFGK 215

  Fly   336 FIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFILDDVKSYAF 400
            |:.|.||..|.||||.|.|||||:||..:.:..||.:|.|| ||..|.||..|:|.|.|.||:.:
plant   216 FVEIQFDDVGRISGAAIRTYLLERSRVCQVSDPERNYHCFY-LLCAAPPEDVERFKLGDPKSFRY 279

  Fly   401 LSNGS-LPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQERNNDQATLP 464
            |:..| ..:.||:|..|:.||.::|:::|::.::.::|||:|:::|..|:::|.:..:.|.:::.
plant   280 LNQSSCYKLDGVNDAEEYLATRRAMDVVGISEKEQDAIFRVVASILHLGNIEFSKGEDADSSSVK 344

  Fly   465 DNTVAQKIAHLLGLSVTDM-----------TRAFLTPR--IKVGRDFVTKAQTKEQVEFAVEAIA 516
            |.   |.:.||...|...|           .|..:||.  ||...|.:..|.::       :.:|
plant   345 DE---QSMFHLQMTSELLMCDPHSLEDALCKRMMVTPEEVIKRSLDPLGAAVSR-------DGLA 399

  Fly   517 KACYERMFKWLVNRINRSL--DRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFN 579
            |..|.|:|.||||:||.|:  |...|:   .||:||:.|||.|:.|||||.|||||||||||.||
plant   400 KTIYSRLFDWLVNKINISIGQDSHSRR---LIGVLDIYGFESFKTNSFEQFCINYTNEKLQQHFN 461

  Fly   580 HTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLID-KPGGIMALLDEECWFPKATDKTFVDKLVS 643
            ..:|.:||.|||:|.|:|.:::| :|.:..:|||: |||||:|||||.|..||:|.:||.:||..
plant   462 QHVFKMEQGEYQKEEIDWSYVEF-VDNKDVVDLIEKKPGGIIALLDEACMLPKSTPETFSEKLYH 525

  Fly   644 AHSMHPKFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKD 708
            ....|.:|||..... :||.:|||||.|.|.:.::|.||.|.:......||..|:..||..::  
plant   526 TFKDHKRFMKPKLTR-SDFTLVHYAGDVQYQSDQFLDKNKDYVVAEHQDLLNASKCSFVSGLF-- 587

  Fly   709 AEIVGMAQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGKI 773
                         ......:.|..|.::...:|.||.:||:||.:|.|:::||:.||:..:....
plant   588 -------------PPLPKESSKSKFSSIGARFKLQLQQLMETLNSTEPHYIRCVKPNNLLQPTVF 639

  Fly   774 DAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELLTPNVIPKGFMDGKKACEKMIQALE 838
            |...||.|||..||||.||:...|:|....|.||..|:.:|.|.:: ||..:.:.||:.:::...
plant   640 DNANVLHQLRSGGVLEAIRVKCAGYPTNRTFIEFLNRFLILAPEIL-KGEYEAEVACKWILEKKG 703

  Fly   839 LDSNLYRVGQSKIFFRAGVLAHLE-----------------------EERDFKISDLIVNFQAFC 880
            |..  |::|:||:|.|||.:|.|:                       .||...:....||.||..
plant   704 LTG--YQIGKSKVFLRAGQMAELDAHRTRVLGESARMIQGQVRTRLTRERFVLMRRASVNIQANW 766

  Fly   881 RGFLARRNYQKRLQQLNAIRIIQRNCAAYLKLRNWQWWRLYTKVKPLLEVTKQEEKLVQKEDELK 945
            ||.:||: ..|.:::..|...||:|....:..::      |.|.|......:...:.:....|. 
plant   767 RGNIARK-ISKEMRREEAAIKIQKNLRRQIAKKD------YGKTKSSALTLQSGVRTMAARHEF- 823

  Fly   946 QVREKLDTLAKNT-QEYERKY----------QQALVEKTTLAEQLQAEIELCAEAEESRSRLMAR 999
              |.||.|.|... |.|.|.|          :.:|:.|:.|..::       |..:..:|:...|
plant   824 --RYKLTTRAATVIQAYWRGYSAISDYKKLKRVSLLCKSNLRGRI-------ARKQLGQSKQADR 879

  Fly  1000 KQELE-DMMQELETRIEEEEERVLAL-----------GGEKKKLELNIQD--------LEEQLEE 1044
            |:|.| :...||..|.||..:....|           .|.|.||.:..:|        ..||.::
plant   880 KEETEKERKVELSNRAEEAVDMSFVLHSEQSDDAESGHGRKAKLSIESEDGLDKSSVLHSEQSDD 944

  Fly  1045 EEAARQKLQLEKVQLDAKIKKYEEDLALTDDQNQKLLKEKKLLE-----ERANDLSQTLAEEEEK 1104
            ||...::    |.:|..:.:....|.: .|::.:...|.|..::     |::..:....:::||.
plant   945 EELGHER----KTKLSIESEDGHSDQS-DDEEIEHERKTKHCIQAEDGIEKSYVMHSDQSDDEEI 1004

  Fly  1105 AKHLAKLKAKHEATISELEER---LHKDQQQRQE---SDRSKRKIETEVADLKEQLNERRVQVDE 1163
            ..   |.|.||.....:..|:   :|.||...:|   ..::|..|:.|     :.:.:..|...|
plant  1005 GH---KRKTKHSIQAEDGIEKSFVVHSDQSDDEEIGHERKTKHAIQVE-----DGIQKSFVTCSE 1061

  Fly  1164 MQAQLAKREEELTQTLLRIDEESAT-KATAQKAQRELESQLAEIQEDLEAEKAARAKAEKVRRDL 1227
            ..........::|..:...:.||.| :....||..::|.|.|:|.|...||  ||...|:.|:.|
plant  1062 KPYNTFSVVSQITSPIRDTEIESLTAEVEMLKALLQVEKQRADISERKCAE--ARELGERRRKRL 1124

  Fly  1228 SE------ELEALKNELLDSLDTTAAQQE--LRSKREQELATL------KKSLEEETVNHEGVLA 1278
            .|      :|:...|.||.|:....:|.:  |||. ....:|:      :..|.:.:.|.|...:
plant  1125 EETERRVYQLQDSLNRLLYSMSDQFSQLKSILRSP-SMSASTMASAPVVRDDLADSSENSEASSS 1188

  Fly  1279 D------MRHKHSQELNSIN-DQLENLRKAKTVLEKAKGTLEAENAD 1318
            |      .....|...::.| :||:.:.:..:..| |||| |:.::|
plant  1189 DSDFTFPAPSPSSDNFSTFNPNQLQVIVQDLSTTE-AKGT-ESYDSD 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 80..117 CDD:280832 8/34 (24%)
Myosin_head 133..854 CDD:278492 285/739 (39%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 278/727 (38%)
Myosin_tail_1 931..2011 CDD:279860 101/452 (22%)
Prefoldin 1431..1515 CDD:298833
FAM76 <1847..1926 CDD:292665
XIJNP_001319790.1 Myosin_N 9..46 CDD:397036 8/38 (21%)
MYSc_Myo11 74..717 CDD:276835 278/727 (38%)
IQ 829..849 CDD:197470 6/19 (32%)
DUF460 <1081..>1142 CDD:421465 20/62 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 1 1.000 - - mtm946
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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