DRSC/TRiP Functional Genomics Resources

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Protein Alignment zip and st6galnac4

DIOPT Version :10

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0287873 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_001072307.1 Gene:st6galnac4 / 779760 XenbaseID:XB-GENE-953044 Length:288 Species:Xenopus tropicalis


Alignment Length:135 Identity:26/135 - (19%)
Similarity:49/135 - (36%) Gaps:37/135 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   877 QAFCRGFLARRN------YQKRLQQLNAIRIIQRNCAAYLKLRNWQWWRLYTKVKPLLEVTKQEE 935
            ||.|   :.|.|      |:..:...:::|::.......| |||..::                 
 Frog    84 QAEC---VLRMNTAPTLGYEADVGSRSSLRVVSHTSVPLL-LRNQTYF----------------- 127

  Fly   936 KLVQKED-------ELKQVREKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESR 993
             ..|.:|       .|:|:........:..|..:..|.|  |:..||.:.:.|..:|..:.|..:
 Frog   128 -FQQSQDTVYVIWGPLRQMDIDSGITYRVLQHTKGMYPQ--VQIYTLTQSMMAHCDLVFQNETGK 189

  Fly   994 SRLMA 998
            :|.|:
 Frog   190 NRAMS 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 79..122 CDD:460670
MYSc_Myh2_insects_mollusks 145..854 CDD:276876
Myosin_tail_1 931..2011 CDD:460256 15/75 (20%)
st6galnac4NP_001072307.1 GT29_ST6GALNAC4 61..287 CDD:467705 26/135 (19%)
Blue background indicates that the domain is not in the aligned region.

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