DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and myo19

DIOPT Version :9

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_001122117.1 Gene:myo19 / 734140 XenbaseID:XB-GENE-999897 Length:969 Species:Xenopus tropicalis


Alignment Length:1145 Identity:319/1145 - (27%)
Similarity:511/1145 - (44%) Gaps:254/1145 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 VPHENQGFVAASIKREHGDEVEVELAETGKRVMILRDDIQKMNPPKFDKVEDMAELTCLNEASVL 148
            |..:.|..::.:.|..:..|.||:.....::.:.|.||:.|:||              :..|:||
 Frog    10 VREQKQNNLSNNNKLNNSFEEEVKAFLIDEKQLHLYDDLTKVNP--------------VTTATVL 60

  Fly   149 HNIKDRYYSGLIYTYSGLFCVVVNPYKKL-PIYTEKIMERY------KGIKRHEVPPHVFAITDS 206
            ..::.||.:|:.||.:|...|.|||::.: .:|:.::|:.|      :|.|     ||:|.:.:.
 Frog    61 KCLQARYSAGVFYTNAGCTVVAVNPFRPVCKLYSSEVMKEYHAASNPQGCK-----PHIFTVAEQ 120

  Fly   207 AYRNMLGDRE--DQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLINFSVNTN 269
            ||:|:....:  :|||:.:||||||||..::.:::|.|.|:||:                     
 Frog   121 AYKNVQSQIQPVNQSIIVSGESGAGKTWTSRCLMKFYATVSASR--------------------- 164

  Fly   270 KYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKNDNSSRFG 334
            .||        .|:.:|                 .:|.::|.:||::||||||.|::|.||||||
 Frog   165 CYI--------TNEMVE-----------------RIESRVLDSNPVMEAFGNACTLRNHNSSRFG 204

  Fly   335 KFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFILDDVKSYA 399
            |:|::..:.:..|:||:|:||||||:|...||..||.||||||::.||:..:||::.|.:..:::
 Frog   205 KYIQLQLNRTQQITGASIQTYLLEKTRVAHQAPLERNFHIFYQVVKGASRHEREEWNLPEKANFS 269

  Fly   400 FLSN--GSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQERNNDQAT 462
            :|.|  .:|      :..:|:.|..:|..:|:.....|:||:|:|.:|..|:::|....:..|..
 Frog   270 WLPNYENNL------EEDDFEVTKDAMLHLGIDQTTQNNIFKILSGLLHLGNIQFSDSVDESQPC 328

  Fly   463 LPDN---TVAQKIAHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQ-TKEQVEFAVEAIAKACYERM 523
            .|.|   ..|...|.||.:.|:.:........|..|:..|.|.. .|.:.:...:.:||..|.|:
 Frog   329 EPLNYTQEFASVAASLLKIPVSHLLERLSIRTITAGKQQVFKKPCRKSECDTRRDCLAKTIYARL 393

  Fly   524 FKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQE 588
            |:|||..||.::.....:..:|||:||:.|||.|..|:.|||||||.||||||.|.......:|:
 Frog   394 FEWLVTVINENICAEAYRWNNFIGLLDVYGFESFPENNLEQLCINYANEKLQQHFVSHYLKSQQD 458

  Fly   589 EYQREGIEWKFIDFGLDLQPTIDLID-KPGGIMALLDEECWFPKATDKTFVDKLVSAHSMHPKFM 652
            ||..||:||.||.: .|.|..:|||: .|..|.:||:|||...:::|...:...:.....|.|.:
 Frog   459 EYAAEGLEWSFISY-QDNQSCVDLIEGSPISIFSLLNEECRLNRSSDAGQLQSRLEKALSHNKSI 522

  Fly   653 KTD-FRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGMAQ 716
            ..| |....:|.:.||||:|.|.......||.||:...::.|||.|.|..:              
 Frog   523 GRDKFSKKPNFIVSHYAGKVQYQIEDMAEKNKDPVPPELIQLLQESDDHLL-------------- 573

  Fly   717 QALTDTQ-----FGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGKIDAP 776
            |.|...:     :||...:.:..||...:|..|..||..|.:|.|:::|||.||.:.:|......
 Frog   574 QILFPVENNKPVYGATNNRAVGVTVVSKFKGSLESLMQILHSTTPHYIRCIKPNVDCQALVFRQE 638

  Fly   777 LVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELLTPNVIPKG-------FMDGKKACEK-- 832
            .||.||...|::|.|.|...|||.||.|:.|.:||.::.|..|...       |:..|:..||  
 Frog   639 EVLMQLEACGIVETINISAAGFPIRISFESFVERYSVIAPRQIHMENNFNDCLFLKKKQGFEKTD 703

  Fly   833 --------MIQAL--------ELDSNLYRVGQSKIFFRAGVLAHLEEERDFKISDLIVNFQAFCR 881
                    ::.|:        .|.:.|...|.:|:|....::..|||.|...|..     :|.|.
 Frog   704 QLPSKLQTILHAVLSKLCKDSTLSNTLVHCGTTKVFLTHLMVELLEERRLEAICS-----KAVCI 763

  Fly   882 GFLARRNYQKRLQQLN-AIRIIQ---------------RNCAAYLKLRNWQWWRLYTKVKPLLEV 930
            ....||..|::|.:.| |...||               .|.|..:| |.|:.|            
 Frog   764 QCCWRRYRQRKLAKQNRAATTIQAAVKGWLTKKYIERMHNAATVIK-RIWKKW------------ 815

  Fly   931 TKQEEKLVQKEDELKQVREKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEIELCAEAEESRSR 995
                             :||::.||                              .||.::|   
 Frog   816 -----------------KEKMEALA------------------------------AAELDDS--- 830

  Fly   996 LMARKQELEDMMQELETRIEEEEERVLAL---GGEKKKLELNIQDLEEQLEEEEAARQKLQLEKV 1057
                   :||:            ||.|.|   ....|.||....:|:::|....|..:...|..|
 Frog   831 -------IEDV------------ERTLLLSVPASPVKTLESPKTNLQDKLLTHSAILKFGTLGLV 876

  Fly  1058 QLDA-KIKKYEEDLALTDD--QNQKLLKEKKLLEERANDLSQTLAEEEEKAKHLAKLKAKHEATI 1119
            ...| .|:||   :..||:  :||.:|....:|..  |:..:..|..||..  :..::|:.:.:|
 Frog   877 LYKAPAIRKY---IVETDELKRNQNILMCLNVLHR--NNRYKVTANCEEPG--ITSIRARPQGSI 934

  Fly  1120 SELEERLHKDQQQRQESDRSKRKIETEVADLKEQLNERRV 1159
                 |.|..:.....::....||...::...|.|.|:.:
 Frog   935 -----RFHYKRSPLHFANICPGKISCGISGFNEILLEKTI 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 80..117 CDD:280832 6/32 (19%)
Myosin_head 133..854 CDD:278492 242/767 (32%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 242/755 (32%)
Myosin_tail_1 931..2011 CDD:279860 44/235 (19%)
Prefoldin 1431..1515 CDD:298833
FAM76 <1847..1926 CDD:292665
myo19NP_001122117.1 MYSc 45..752 CDD:214580 250/792 (32%)
MYSc_Myo19 57..741 CDD:276846 242/755 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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