DRSC/TRiP Functional Genomics Resources

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Protein Alignment zip and myo16

DIOPT Version :9

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster
Sequence 2:XP_001920958.3 Gene:myo16 / 563752 ZFINID:ZDB-GENE-070912-470 Length:1910 Species:Danio rerio


Alignment Length:1160 Identity:290/1160 - (25%)
Similarity:486/1160 - (41%) Gaps:252/1160 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LHPKSEYPVSNIHYPKAANYRQTRNYLEIAAKMSE-------EVDRNDPELKYLSVERNQ-FNDP 70
            |..|::..:.|.:..|.::...|.:..|:..:..|       :...:.|:.:..|.|.|| .|.|
Zfish   296 LKHKADPTLLNCNQDKPSDIAATEHIAEMLLRAEEFWVQRQRDPSASPPQSEDHSAEANQDDNLP 360

  Fly    71 ----ATQA-------EWTQKRLVWVPHENQGFVAASIKREHGDEVEVELAETGKRVMILRDDIQK 124
                ||.|       ...:|..::  .::.|.:......::|.:.....| .||...:      |
Zfish   361 VKKLATMALPISRRDSLLEKEAMF--RDSGGALTQQASLDNGLDGSYPSA-AGKLEQV------K 416

  Fly   125 MNPPKFDKVEDMAELTCLNEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLPIYTEKIMERY- 188
            :.||..:  :|:|.|:.|.::|:|:.::.|:.:..||||.|...:::||||.||||:..:.:.| 
Zfish   417 LMPPAPN--DDLASLSELTDSSLLYEMQKRFANDQIYTYIGHILLLINPYKDLPIYSNLVSQLYL 479

  Fly   189 --KGIKRHEVPPHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKG 251
              .|.....:|||:|:..:.|:..|..:|..|..:.:||||:||:...|.:::.||  |.|.|||
Zfish   480 SSSGRLCSSLPPHIFSSAERAFHMMFQERRPQCFIISGESGSGKSVACKHILKHLA--ARSSPKG 542

  Fly   252 SGAVPHPAVLINFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPIL 316
            ..                                                   ||.::...|.||
Zfish   543 FA---------------------------------------------------LEPRMKHVNVIL 556

  Fly   317 EAFGNAKTVKNDNSSRFGKFIRINF-DASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLA 380
            ||||:|||..|.:.|||.|.|.:.: |....:....:.||:|||||.|.....::.|:|||.:..
Zfish   557 EAFGHAKTQMNTSGSRFIKLISLQYCDKRKTLLRGRLYTYMLEKSRVICMPPHQQNFNIFYLMAE 621

  Fly   381 GATPEQREKFILDDVKSYAFLSNGSLPVPG---------VDDYAEFQATVKSMNIMGMTSEDFNS 436
            |.:.|::.:..|::|.::..|:..:   ||         .....:..|..:::..:|....:..:
Zfish   622 GLSAEEKSQLYLNNVLAHRCLNTAA---PGESPAVASACPQSREKLLALKQALRALGFNKLEVEN 683

  Fly   437 IFRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAHLLGLSVTDMTRAFLTPRIKVGR-DFVT 500
            :|.::||:|..|.::|....:.|.|.:.|..:..::|.:|.:|..|::.| ||..::..: |.:|
Zfish   684 VFVLISALLHLGDLRFTALTDADTAFVSDLQLLDRVAGMLQVSSEDLSSA-LTSDVQCFKGDVIT 747

  Fly   501 KAQTKEQVEFAVEAIAKACYERMFKWLVNRINRSL---DRTKRQGASFIGILDMAGFEIFELNSF 562
            :..|.|......:.:.||.|.|:|..|||.||..|   :.|....|..|.|||:.|||.|:.|::
Zfish   748 RRHTVEMSNHHRDLLTKALYGRLFSLLVNNINFYLQGHEETTGDPALEISILDIFGFEEFQRNAY 812

  Fly   563 EQLCINYTNEKLQQLFNHTMFILEQEEYQREGI----------EWKFIDFGLDLQPTIDLIDKPG 617
            ||||||..||::.|.....:|..||.|..:||:          :...:||         ...||.
Zfish   813 EQLCINMVNERIHQFTAEVLFQQEQHECLQEGVAMETLRSLGSQTAVLDF---------FFQKPQ 868

  Fly   618 GIMALLDEECWFPKATDKTFVDKL--------VSAHSMHPKFMKTDFRG-------VADFAIVHY 667
            |::.::|||....:..:.....:|        ..|.|:..|    |..|       ...|.:.|:
Zfish   869 GVLCIIDEESQSLRPCEVNLYKRLQIQLDSSATDAVSLTTK----DGNGNPPPKDQGPSFTVTHF 929

  Fly   668 AGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGMAQQALTDT--------QF 724
            ||::.|.....|.:|.|.|.:||:         ||:...::..|..|.|..||.|        :.
Zfish   930 AGKMTYDLTGSLDRNKDVLPQNIL---------FVMKTSENVLIHQMFQCKLTQTGSLVPQHQRM 985

  Fly   725 GARTRKGMF----------------------------------------RTVSHLYKEQLAKLMD 749
            ..|..||..                                        .||:...|..|.::..
Zfish   986 KLRGPKGTLINKSTTLNPARDAKKYVELNKLLKKKGASSFLQRLERCGPITVAVQLKNSLCEITS 1050

  Fly   750 TLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELL 814
            .|::..|:|::|:.||:..:....|:..|..||:..||||.:|:.|.|:|.|:.|..|..||..|
Zfish  1051 KLQSCTPHFIQCVRPNNASKPDVFDSFHVSSQLQYVGVLEMVRMIRYGYPVRLSFSSFLSRYREL 1115

  Fly   815 TPNVIPKGFMDGKKA-----CEKMIQALELDSNLYRVGQSKIFFRAGVLAHLEEERDFKISDLIV 874
            ...:|    .|.|||     |..::...:|..  :::|.||:|.|.....|| .:|..::...|:
Zfish  1116 VDTII----TDRKKATTEEKCRHILLHCKLQG--WQMGNSKVFLRYWQADHL-NDRCHQLHRKII 1173

  Fly   875 NFQAFCRGFLARRNYQKRL----QQL-NAIRIIQRNCAAYLKLRNW---------------QWWR 919
            ..|...||:|||:..::||    |:| |..|.:|.  |..|.||.:               ...|
Zfish  1174 ICQKVMRGWLARQQVRRRLTSRKQELCNVQRFLQG--AEDLGLRTYDNLVIQNAADIARENDRLR 1236

  Fly   920 LYTKVKPLLEVTKQEEKLVQKEDELKQVREKL----DTLAKNTQEYERKYQQA-----LVEKTTL 975
            .:....||.|   :.|.:.::||..|:|.||.    |...:......|.::.:     ||..:.:
Zfish  1237 GHISAPPLGE---RPEPVGKEEDSPKRVVEKSGRGNDVANRGGNRPIRHFRSSSVPLPLVMDSLV 1298

  Fly   976 AEQLQAEIELCAE-----AEESRSRLMA--RKQELEDMMQELETRIEEEEERVLA 1023
            ...:.|.|:...:     .:|.....::  |||......::..||:....|.|.|
Zfish  1299 HSSIGASIKAALQPTPHSTDEGNGGSLSSPRKQPPPKPKRDPNTRLSASYEAVSA 1353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 80..117 CDD:280832 5/36 (14%)
Myosin_head 133..854 CDD:278492 216/815 (27%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 212/803 (26%)
Myosin_tail_1 931..2011 CDD:279860 22/109 (20%)
Prefoldin 1431..1515 CDD:298833
FAM76 <1847..1926 CDD:292665
myo16XP_001920958.3 ANK 88..186 CDD:238125
Ank_2 90..177 CDD:289560
ANK repeat 113..144 CDD:293786
Ank_2 118..273 CDD:289560
ANK 141..296 CDD:238125 290/1160 (25%)
ANK repeat 146..207 CDD:293786
ANK repeat 242..273 CDD:293786
Ank_2 247..329 CDD:289560 6/32 (19%)
ANK repeat 275..306 CDD:293786 2/9 (22%)
MYSc 424..1164 CDD:214580 219/825 (27%)
Motor_domain 435..1154 CDD:277568 212/803 (26%)
NYAP_N 1252..1641 CDD:292079 21/102 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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