DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and myo5c

DIOPT Version :9

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster
Sequence 2:XP_691143.2 Gene:myo5c / 562676 ZFINID:ZDB-GENE-131127-196 Length:1746 Species:Danio rerio


Alignment Length:1980 Identity:522/1980 - (26%)
Similarity:852/1980 - (43%) Gaps:476/1980 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 WTQKRLVWVPHENQGFVAASIKREH--GD-EVEVEL---------AETGKRVMILRDDIQKMNPP 128
            :|:...||:|.....:.:|.|..:.  || |:|::|         .|.|:::..||      ||.
Zfish     7 YTKYNRVWIPDAEHVWKSAEILTDFKPGDSELELQLEDGTELHYPLEGGEKLPPLR------NPD 65

  Fly   129 KFDKVEDMAELTCLNEASVLHNIKDRYY-SGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIK 192
            ......|:..|:.|:|.:||||:|.|:. |.:||||.|:..|.|||||:||||.:.::..|.|..
Zfish    66 ILVGENDLTALSYLHEPAVLHNLKVRFVESKIIYTYCGIILVAVNPYKQLPIYGDAVIHAYSGQN 130

  Fly   193 RHEVPPHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPH 257
            ..::.||:||:.:.||:.|..:.::|||:.:||||||||.:.:..:::.|.|:.|..|       
Zfish   131 MGDLDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAMVSKSGSK------- 188

  Fly   258 PAVLINFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNA 322
                                                         ..:|.::|.:|||.||.|||
Zfish   189 ---------------------------------------------TRVEDKVLASNPITEAIGNA 208

  Fly   323 KTVKNDNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGAT-PEQ 386
            ||.:|||||||||:..|:||....|.|||:.||||||||.:.|:::||.:|||||:.|.|. ||.
Zfish   209 KTTRNDNSSRFGKYTEISFDKRYQIIGANMRTYLLEKSRVVFQSENERNYHIFYQMCACANQPEF 273

  Fly   387 R-------EKFILDDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAV 444
            :       |||      :|..| .|.:.:.||||.|:...|.::.|::|:.......:|::::|:
Zfish   274 KGLRLLGAEKF------NYTRL-GGEIEIEGVDDRADMAETRRTFNLLGLKENFQTDVFKVLAAI 331

  Fly   445 LLFGSMKFRQERNNDQATLPDNT-VAQKIAH------LLGLSVTDMTRAFLTPRIKVGRDFVTKA 502
            |..|::..:       |..|:.: :..:..|      |:|:|..:|:|.....||.:..:.|.|.
Zfish   332 LHLGNVIIK-------AKDPEKSFIGSRDPHLAIFCDLMGVSTENMSRWLCHRRIVLSTETVVKP 389

  Fly   503 QTKEQVEFAVEAIAKACYERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCI 567
            |.:|:...|.:|:||..|..:|.|::::||.:|....:| .||||:||:.|||.||:|||||.||
Zfish   390 QPRERAVNARDALAKHIYAHLFNWVIHKINHALMVPGKQ-HSFIGVLDIYGFETFEINSFEQFCI 453

  Fly   568 NYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPGGIMALLDEECWFPKA 632
            ||.||||||.||..:|.||||||.:|.|.|..||| .|.||.||||:...||:.||||||.||:.
Zfish   454 NYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDF-YDNQPVIDLIEAKMGILDLLDEECLFPQG 517

  Fly   633 TDKTFVDKLVSAHSMHPKFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGS 697
            |||.::.||.:.....|.|.|..... ..|.|.|:|.:|:|....:|.||.|.|.|.:|.:::.|
Zfish   518 TDKNWLQKLYNFLGSKPLFEKPRLSN-DSFMIQHFADKVEYQCKGFLEKNRDTLYEELVDIMRAS 581

  Fly   698 QDPFVVNIWKDAEIVGMAQQALTDTQFGARTR---KGMFRTVSHLYKEQLAKLMDTLRNTNPNFV 759
            |...:...:|:.| .....:.:..|....|.:   |.:..||...::..|..||:||..|.|::|
Zfish   582 QFALLAGFFKEEE-ADSGHKIIKVTPAQPRVKASNKQLRSTVGDKFRSSLYLLMETLNATTPHYV 645

  Fly   760 RCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYE-LLTPNVIPKGF 823
            |||.||.||...:.|:..|:.|||..||||.|||..|.:|:|..:.||..||. |::.:.:..| 
Zfish   646 RCIKPNEEKLPFEYDSRRVVQQLRACGVLETIRISAQSYPSRWTYVEFYSRYSILMSQSELKLG- 709

  Fly   824 MDGKKACEKMIQALELDSNLYRVGQSKIFFRAGVLAHLEEERDFKISDLIVNFQAFCRGFLARRN 888
             :.|:.|..::|.|..|||.|:.|::|||||||.:|:||:.|...:....|..|...||:..||:
Zfish   710 -EKKQTCRTVLQRLIPDSNQYKFGRTKIFFRAGQVAYLEKLRLDHLRAACVTIQKHVRGWRQRRS 773

  Fly   889 Y-------------------------QKRLQQLNAIRIIQRNCAAYLKLRNWQ------------ 916
            :                         .:.|:|..|..:|||:|..:|..|.:|            
Zfish   774 FLNIRQAALIIQLYVRGKKQIRCTVTAQALKQGWAAIVIQRHCRGFLVRRIYQLVLRAAVTIQAF 838

  Fly   917 --WWRLYTKVKPLLEVTKQEEKLVQKEDELKQVREKLDT---------LAKNTQEYERKYQQALV 970
              .|....:.|.:  |.:.:..::||......||.:..|         |:...|:..:|.::...
Zfish   839 TRGWMARKRYKKM--VAEHKALVLQKYARAWLVRRRFQTMRRLVINVQLSYRVQQLRKKVEEQNK 901

  Fly   971 EKTTLAEQLQAEIELCAEAEESRSRLMAR----KQELEDMMQELETRIEEEEERVLALGGEKKKL 1031
            |...|.|:|.:.....|:..|....|.|.    ..|:..::|..:|..||..:.:..|..:|:||
Zfish   902 ENCGLMEKLTSLSNARAQGLEKIQALEAELGKLTNEMSALVQRAKTNSEEANQAIDVLQNDKEKL 966

  Fly  1032 ELNIQDLEEQLEEEEAARQKLQLEKVQLDAKIKKYEEDLALTDDQNQKLLKEKKLLEERANDLSQ 1096
                      :||.:|..:||:...||:..:.    ||:            ::||:|:       
Zfish   967 ----------VEENKALERKLKDTTVQMQDQF----EDV------------KRKLMED------- 998

  Fly  1097 TLAEEEEKAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRKIETEVADLKEQ---LNERR 1158
              .|.||:.:.:|:                |..:.|:::||:       |:..:||:   |.|.|
Zfish   999 --LEREERLRKVAE----------------HNSELQKEDSDK-------EIVAIKEENRRLREER 1038

  Fly  1159 VQVDEMQAQLAKREEELTQTLLRIDEESATKATAQKAQRELESQLAEIQEDLEAEK-AARAKAEK 1222
            :::.....:..|...||.:.:|::.:........:|....|:.|.||.::.|.|:. .||||...
Zfish  1039 IRLQTQVEEDVKTNTELQEQMLQLTKHVKVIPDLRKEINNLQIQRAEAEKTLRAQNLQARAKMNL 1103

  Fly  1223 VRR----DLSEE--LEALKNELLDSLDTTAAQQELRSKREQELATLKKSLEEETVNHEGVLADMR 1281
            :.|    |.:|:  ::.|..|..|:.|..|.........|:....::..|.|:...||..|..:.
Zfish  1104 ITRQLLGDATEQDLIQRLNEEASDNNDDGADLITAFDGMERAAKVMETQLREQKDAHESQLEALI 1168

  Fly  1282 HKHSQELNSINDQLENLRKAKTVLEKAKG----TLEAEN---ADLATELRSVNSSRQENDRRRKQ 1339
            .| ::.|:..|:||:.|.:.|:.:.::.|    .|.|||   .:|..::..:|..:.|.:   .|
Zfish  1169 FK-NEHLSKENEQLQALFQEKSDINQSIGQEVTRLTAENMVIPELKQQVSELNRHKHELE---SQ 1229

  Fly  1340 AESQIAELQVKLAEIERA-----------RSELQEKCTKLQQEAENITNQLEEAELKASAAVKSA 1393
            .:.|.||:..||.|:..|           |..|||:.|:.|:..|....|:.|.:          
Zfish  1230 LQDQTAEMSAKLKELSSALHLAVEEEQSQRRRLQEELTESQRRREETDRQISELQ---------- 1284

  Fly  1394 SNMESQLTEAQQLLEEETRQKLGLSSKLRQIESEKEALQEQLEEDDEAKRNYERKLAEVTTQ--- 1455
              .|:|..:..|:.|.:.:..|.|.:.  ::.:|....:|||:..|...:..:.::..:.|.   
Zfish  1285 --EENQQLKKAQITESQAKNTLRLETS--RLTAENMDFEEQLDMKDRLIKRLQDQIKALQTHAAA 1345

  Fly  1456 --------------MQEIKKKAE---------------------------------EDADLAKEL 1473
                          |.|.||:.|                                 ..||...:.
Zfish  1346 NQKAAPAVPKEYLGMLEYKKEDEGRLIRILILELKPRGVGVNMIPGLAAHLLFMCVRHADYLNDG 1410

  Fly  1474 EEGKKRLNKDIEALERQVKELIAQNDR--------LDKS------KKKIQSELEDATIELEAQRT 1524
            .:.|..:|..|.|    |||:|.::..        |..:      .|:...|.|........|..
Zfish  1411 NKLKCLMNNIITA----VKEVITEHQENFELLSFWLSNTYHFLNCLKQYSGEEEFMKHNTPRQNK 1471

  Fly  1525 KVLELEKKQKNFDKILAEEKAISEQIA-----------------------QERDTAEREAREKET 1566
            ..|      ||||  |:|.:.|...:|                       .|.::.:..:..|.|
Zfish  1472 NCL------KNFD--LSEHRQILSDLAINIYHQFISVMEDALFPMIIPGMLEHESLQGISSMKPT 1528

  Fly  1567 KVLSVSREL---------DEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALES 1622
            .:...|..:         .||| .:..:..|..|..:.:                   .::.:|.
Zfish  1529 GLRKRSSSVFEDGGDSSTSEAF-SVSSILQKLSTFNSSM-------------------CQQGMEP 1573

  Fly  1623 QLAELKAQNEELEDDLQLTEDAKLRLEVNMQALRSQFERDLLAKEEGAEEKRRGLVKQLRDLETE 1687
            ||     |.:.:.....|...:    .||...||    :||.:..:|         .|:|...:.
Zfish  1574 QL-----QGQIVRQLFYLIGSS----SVNCILLR----KDLCSCRKG---------MQIRCNISY 1616

  Fly  1688 LDEERKQRTAAVASKKKLEGDLKEIETTMEMHNKVKEDALKHAKKLQAQVKDALRDAEEAKAAKE 1752
            |:|..:::....::..:..|.|.:|...::::....|||                          
Zfish  1617 LEEWLREKDLLSSNAMETLGPLSQIAWLLQVNKTTDEDA-------------------------- 1655

  Fly  1753 ELQALSKEAERKVKALEAEVLQLTEDLASSERARRAAETERDELAEEIANNANKGSLMIDEKRRL 1817
                    ||.|.:..|...:|:.:.|.|        .|..|:.                |||..
Zfish  1656 --------AEIKQRCSELSAVQIVKILNS--------YTPIDDF----------------EKRVA 1688

  Fly  1818 EARIATLEEELEEEQSNSEVLLDRSRKAQL 1847
            .:.:..::..|:|.:.:|::::|...:.|:
Zfish  1689 PSFVRKVQALLQEREGSSQLMMDSQYRFQV 1718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 80..117 CDD:280832 12/48 (25%)
Myosin_head 133..854 CDD:278492 277/740 (37%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 273/728 (38%)
Myosin_tail_1 931..2011 CDD:279860 201/1054 (19%)
Prefoldin 1431..1515 CDD:298833 24/147 (16%)
FAM76 <1847..1926 CDD:292665 0/1 (0%)
myo5cXP_691143.2 MYSc 63..750 CDD:214580 286/758 (38%)
MYSc_Myo5 82..739 CDD:276831 273/728 (38%)
IQ 808..826 CDD:197470 7/17 (41%)
IQ 830..849 CDD:197470 1/18 (6%)
Laminin_I 1068..1314 CDD:283627 63/263 (24%)
GBP_C <1176..1291 CDD:303769 32/129 (25%)
coiled coil 1280..1291 CDD:293879 3/22 (14%)
Myo5c_CBD 1366..1740 CDD:271260 73/465 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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