DRSC/TRiP Functional Genomics Resources

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Protein Alignment zip and Myo28B1

DIOPT Version :9

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster


Alignment Length:2131 Identity:531/2131 - (24%)
Similarity:895/2131 - (41%) Gaps:456/2131 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 VWVPHENQ------GFVAASIKREHGDEVEVELAETGKRVMILRDDIQK-MNPPKFDKVEDMAEL 139
            |||..:|.      .|.|..::.|....:..:  :..|:..:...|:.| |:....:.||||..|
  Fly    13 VWVKPQNTTSEFAVPFGARIVRTEKTQTLVCD--DRNKQFWVPAGDVLKAMHITSQEDVEDMITL 75

  Fly   140 TCLNEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIKRHEVPPHVFAIT 204
            ..|.|.::|.|:::||...|||||:|...|.:|||:.|||||.:.::.|:.....|:|||:|||:
  Fly    76 GDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELPPHIFAIS 140

  Fly   205 DSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLINFSVNTN 269
            |:|::.:...:|:|.::.:|||||||||:||.::|:||.::.                       
  Fly   141 DNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISG----------------------- 182

  Fly   270 KYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKNDNSSRFG 334
                                           :...:|||:::||||:|||||||||:||||||||
  Fly   183 -------------------------------KHSWIEQQIIEANPIMEAFGNAKTVRNDNSSRFG 216

  Fly   335 KFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFILDD--VKS 397
            |:|.|.|...|.|.||.|:.|||||||.:.|::|||.:||||.:|||.:..:||:..|.:  ...
  Fly   217 KYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFYCMLAGLSTAERERLKLQEQSPSQ 281

  Fly   398 YAFLSNGS-LPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKF--RQERNND 459
            |.:|:.|. ..:||..|..:|.....:|.::....|:..||..:::|:|..|:::|  .:..|..
  Fly   282 YHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSILSLLAAILHLGNLRFTATEVANLA 346

  Fly   460 QATLPDNTVAQKIAHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIAKACYERMF 524
            .|.:.|....|::|.|||:.::.:..|.....|.|..:.||.:.:||......:|..|:.|:.:|
  Fly   347 TAEIDDTPNLQRVAQLLGIPISALNAALTQRTIFVHGEHVTTSLSKEAAIEGRDAFVKSLYDGIF 411

  Fly   525 KWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEE 589
            ..:|.|||.::::...|..:.||:||:.|||.|:.||||||||||.||.|||.|...:|.:||:|
  Fly   412 VRIVRRINETINKQVDQPMNSIGVLDIFGFENFDNNSFEQLCINYANENLQQFFVGHIFKMEQDE 476

  Fly   590 YQREGIEWKFIDFGLDLQPTIDLID-KPGGIMALLDEECWFPKATDKTFVDKLVSAHSMHPKFMK 653
            ||.|.|.|:.|:| .|.|..:|||. ||..:|:|:|||..|||.||:|.::||...|.....::|
  Fly   477 YQNEHINWQHIEF-QDNQQILDLIGMKPMNLMSLIDEESKFPKGTDQTLLEKLHVQHGNRSIYVK 540

  Fly   654 TDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGMAQQA 718
            ......:.|.|.||||.|.|:...:|.||.|..:.::.:|:|.|.:.::|:|:.....:..|::.
  Fly   541 GKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYLVDIFPHEMPMDTAKKQ 605

  Fly   719 LTDTQFGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLR 783
                           .|:...::..|..||.||...:|.|:|||.||..|.....|..|.:.|||
  Fly   606 ---------------PTLCVKFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLR 655

  Fly   784 CNGVLEGIRICRQGFPNRIPFQEFRQRYELLTPNVIPKGFMDGKKACEKMIQ-ALELDSNLYRVG 847
            .:|::|..||.|.|:|.|..::.|.:||.||.|.|.|....|.:|...::.: ||..||: .:.|
  Fly   656 YSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQCDCRKLARQICEVALPADSD-RQYG 719

  Fly   848 QSKIFFRAGVLAHLEEERDFKISDLIVNFQAFCRGFLARRNYQKRLQQLNAIRIIQRNCAAYLKL 912
            ::|:|.|....|.||.:|...:...||..|...|..|.|| |.||.::  ||..:||.....|:.
  Fly   720 KTKLFLRDEDDASLELQRSQLMLKSIVTIQRGIRRVLFRR-YMKRYRE--AIITVQRYWRGRLQR 781

  Fly   913 RNWQWWRLYTKVKPLLEVTKQ----------EEKLVQKEDELKQVREKLDTLAKNTQEY--ERKY 965
            |.:|             |.:|          .::|..|...::....||..|::.   |  .:.:
  Fly   782 RKYQ-------------VMRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQALSRG---YLVRKDF 830

  Fly   966 QQALVEKTTLAEQLQAEIELCAEAEESRSRLMARKQELEDMMQELETRIEEEEERVLALGGEKKK 1030
            |:.|:|:.. ..||:.| ||...|:...:..:.|.|:|:: .:|.|.| |::|:|          
  Fly   831 QKKLLERRK-QNQLKKE-ELLKLAKMKEAEELLRLQQLKE-QKEREQR-EQQEKR---------- 881

  Fly  1031 LELNIQDLEEQLEEEEAARQKLQLEKVQLDAKIK--KYEEDLALTDDQNQKLLKEKKLLEERAND 1093
                :|: |::|:.|.|||..|.:..||...:.|  |.|...|.|       |:.:..|......
  Fly   882 ----LQE-EQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPT-------LQARNSLPPPPTT 934

  Fly  1094 LSQTLAEEEEKAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRKIETEVADLKEQLNERR 1158
            |..........|..:.::.     ||.|....:        :.:.||:.::    |:...||   
  Fly   935 LIVAAPLPTRPASAVTRIN-----TIPESPGTI--------DVESSKQMVD----DVFRFLN--- 979

  Fly  1159 VQVDEMQAQLAKREEELTQTLLRIDEE---------------SAT----KATAQKAQRELESQLA 1204
               ||..|.|.|.....:...:|:.:.               :||    .||||..::.|:..|.
  Fly   980 ---DEPDAALRKLNNISSGDTIRLPKSVPNNIDTSDFSYLKYAATYFGGGATAQHERKPLKKSLL 1041

  Fly  1205 EIQEDLE--AEKAARAKAEKVRRDL-----SEELEALKNE--------LLDSLDTTAAQQELRSK 1254
            :.:..::  |.||......:...||     |..|....||        ||::.|:...:..:|..
  Fly  1042 KHEHPIDEMASKAIWLTILRFMGDLPDVVSSPTLHVFDNENLMSDLASLLNTSDSYKPRLFVRQS 1106

  Fly  1255 RE---QELATLKKSLEEETVNHEGVLADMRHK------HSQELNSINDQLENLRKAKTVLEKAKG 1310
            :.   :.||:.:|..:|...:...|......|      |....||:.|::......:..|..::.
  Fly  1107 QRRIPKPLASGEKEAQEFYQHWLNVPTSHLEKIHFIIGHGIIKNSLRDEILAQICKQLYLNPSRS 1171

  Fly  1311 TLEAENADLATELRSVNSSRQENDRRRKQAESQIAELQV--KLAEIERARSELQEKCT------- 1366
            :.......|:..|.....|::.....|...:...|:||.  .|..:||.... ..:|.       
  Fly  1172 SYSRGWLLLSLCLSCFPPSKEFEPHLRSFMKQGTAQLQATPSLQRLERTLVN-GPRCQPPSLFEL 1235

  Fly  1367 -------KLQQEAENITNQLEEAELKASAAVKSASNMESQLTEAQQLLEE-ETRQKLGLSSKLRQ 1423
                   .|:.:...:..|....::.|::..:.|.|   ||.:...|.:. .....:.|:.||..
  Fly  1236 HAIRGRHPLRLDIHLMDGQQRRLQVDAASTAREAVN---QLCQGMGLTDTFGFGLVMSLNGKLMP 1297

  Fly  1424 IESEKEALQEQLEEDDEAK-----RNYERKLAEVTTQMQEIKKKAEEDADLAKELEEGKK----- 1478
            :.:.:|.:.:.:.|.::.:     :.|.||....|.....:..||.:  .:.|::..|.|     
  Fly  1298 LGAGQEHVLDAISECEQRQLDAPWKLYIRKEMFATWYDPSMDPKATQ--LIYKQILNGLKCGEYR 1360

  Fly  1479 -RLNKDI---------------EALERQVKELIA--QNDRLDKSKKKIQ--SELEDATIE----- 1518
             |..|||               |.|..:..|:.|  .:|.|...::.|:  |.|..||.|     
  Fly  1361 CRSEKDIAMVCALACFVEYGPGEILRLKPSEITAFVPSDLLAPGERAIENWSRLIAATYEKSSYV 1425

  Fly  1519 LEAQRTKVLELEKKQKN-----------------FDKILAE-EKAISEQIAQERDTAEREAREKE 1565
            .|.|...:||.:|:.|.                 |:.:..| .|..|:::....::|.....::.
  Fly  1426 KEEQNDLLLEAQKRAKEDICLFAHLSWPMRHSRLFEVVRKEGPKLQSDELMLGINSAGLFLIDET 1490

  Fly  1566 TKVLS------VSRELDEAFDKIEDLENKRKTLQ--NELDDLANTQGTADKNVHELEKAKRALES 1622
            .:||:      |.:...|:.||:..:     |.|  |.:...::.|...:...:.|:..::....
  Fly  1491 EQVLASCCFSEVLKVHVESDDKLHVM-----TFQHVNFVLQCSSAQDANEVINYMLDNLRQRSSY 1550

  Fly  1623 QLAELKAQNEELEDDLQLTEDAKLRLEVNMQALRSQFERDLLAKEEGAEEKRRGLV--------- 1678
            .:|.......:|||.|.|.....:..|..:...:      |:|  ..|::..||.|         
  Fly  1551 GVALDPVVEGDLEDCLVLNPGDLIEFEAGVTGAQ------LMA--GNAQDCYRGCVNGQWGQFLA 1607

  Fly  1679 -------------KQLRDL--ETELDEERKQRTAAVASKKKLEGDLKEIETTMEMHNKVKEDALK 1728
                         ::|:|:  |....|..|....|..|:::             .|| :.:.|..
  Fly  1608 GNVRVLATLTKPSEKLQDILREGRFQEPPKPTPRANYSRRR-------------QHN-ISQLAES 1658

  Fly  1729 HAKKLQAQVKDALRDAEEAKAAK---EELQALSKEAERKVKAL-------EAEVLQLTEDLASSE 1783
            |       .::.| |:::|..:|   |.|:|...:|..||..|       ...:|:...|:|.| 
  Fly  1659 H-------FREPL-DSDKAPLSKFSPEPLKAPLLKAVVKVPPLFQQALVMHHHILKYMGDIARS- 1714

  Fly  1784 RARRAAETERDELAEEIANNANKGSLMIDEKRRLEARIATLEEELEEEQSNSEVLLDRSRKAQLQ 1848
                                    :|.:                      |::::...:.:..|.
  Fly  1715 ------------------------NLPV----------------------NTDLIFQPALQHPLL 1733

  Fly  1849 IEQLTTELANEKSNSQKNENGRALLERQNKELKAKLAEIETAQRTKVKATIATLEAKIANLEEQL 1913
            .::|..:|..:.|::..:|:     |::..:|      :..|......:.:...|..|       
  Fly  1734 CDELYCQLMKQLSDNPSSES-----EKRGWDL------LYLATGLVAPSVLVMRELII------- 1780

  Fly  1914 ENEGKERLLQQKANRKMDKKIKELTMNIEDERRHVDQHKEQMDKLNSRIKLLKRNL---DETEEE 1975
                   ||:.:|:...|..:|.|..::...:|....|..:::.:..|...:...:   |:|.|.
  Fly  1781 -------LLRMRADALADACLKRLKRSLAQGQRKKAPHLIEVEGIQQRCLHIYHKIYFPDDTVEA 1838

  Fly  1976 LQKEKTQKRKYQRECEDMIESQEAMNREINSLKTKLRRTGGIGLSSSRLTG 2026
            .:                |||.......|..:..:|.....:|.|....||
  Fly  1839 FE----------------IESHTRGAELIADIAQRLELKSPVGYSIFLKTG 1873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 80..117 CDD:280832 8/40 (20%)
Myosin_head 133..854 CDD:278492 264/727 (36%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 257/715 (36%)
Myosin_tail_1 931..2011 CDD:279860 228/1251 (18%)
Prefoldin 1431..1515 CDD:298833 23/113 (20%)
FAM76 <1847..1926 CDD:292665 12/78 (15%)
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 268/745 (36%)
MYSc_Myo7 81..726 CDD:276832 257/715 (36%)
IQ 765..785 CDD:197470 6/21 (29%)
DUF4355 827..>887 CDD:290964 20/78 (26%)
MyTH4 1031..1239 CDD:295320 37/208 (18%)
B41 1248..1429 CDD:214604 38/185 (21%)
FERM_N 1248..>1288 CDD:286467 7/42 (17%)
FERM_B-lobe 1342..1429 CDD:271216 21/88 (24%)
PH-like 1454..1547 CDD:302622 16/97 (16%)
MyTH4 1674..1819 CDD:214535 31/216 (14%)
B41 1827..2032 CDD:214604 12/63 (19%)
FERM_N 1829..>1877 CDD:286467 12/61 (20%)
FERM_M 1936..2032 CDD:278785
FERM_C2_MyoVII 2028..2121 CDD:270020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466219
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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