DRSC/TRiP Functional Genomics Resources

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Protein Alignment zip and Myo19

DIOPT Version :10

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0287873 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_001157208.1 Gene:Myo19 / 497974 RGDID:1559961 Length:964 Species:Rattus norvegicus


Alignment Length:983 Identity:282/983 - (28%)
Similarity:448/983 - (45%) Gaps:184/983 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 DDIQKMNPPKFDKVEDMAELTCLNEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLP-IYTEK 183
            ||:.|:||...:.|     |.||         :.||...:.||.:|...|.:||:|.:| :|..:
  Rat    38 DDLTKVNPVTLETV-----LRCL---------QARYTEDIFYTNAGCTLVALNPFKHIPQLYAPE 88

  Fly   184 IMERYKGIKRHEVP------PHVFAITDSAYRNM--LGDREDQSILCTGESGAGKTENTKKVIQF 240
            :|:.|     |..|      ||:|.:.:..|||:  |.:..:|||:.:||||||||..::.:::|
  Rat    89 LMQEY-----HAAPQPQKLKPHIFTVGEQTYRNVKSLIEPINQSIVVSGESGAGKTWTSRCLMKF 148

  Fly   241 LAYVAASKPKGSGAVPHPAVLINFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGEL 305
            .|.||||...                           .:|.          ||.|        .:
  Rat   149 YAVVAASPTS---------------------------CENH----------KMAE--------RI 168

  Fly   306 EQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDER 370
            |:::|.:||::||||||.|::|:|||||||||::..:.:..::||.::||||||:|...||..||
  Rat   169 EERILNSNPVMEAFGNACTLRNNNSSRFGKFIQLQLNRAQQMTGAAVQTYLLEKTRVACQAASER 233

  Fly   371 TFHIFYQLLAGATPEQREKFILDDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFN 435
            .||||||:..|||.|:|.::.|.:..::::|.|   |...:::.. |:.|.::|..:|:.:...|
  Rat   234 NFHIFYQICKGATKEERLQWCLPEGTAFSWLPN---PESSLEEDC-FEVTREAMLHLGIDTPTQN 294

  Fly   436 SIFRIVSAVLLFGSMKFRQERNNDQ-ATLPDNTVAQKIAHLLGLSVTD--MTRAFLTPRIKVGR- 496
            :||::::.:|..|::.|....:..| ..|.|.|........|.|.:.|  :..:.....||.|: 
  Rat   295 NIFKVLAGLLHLGNVHFVDSEDEAQPCQLMDGTKGSVRTSALLLQLPDNMLLESMQIRTIKAGKQ 359

  Fly   497 -DFVTKAQTKEQVEFAVEAIAKACYERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELN 560
             ....|..::.:.:...:.:||..|.|:|.|||:.||.|:........:|||:||:.|||.|..|
  Rat   360 QQVFQKPCSRAECDTRRDCLAKLIYARLFDWLVSVINSSICADFSSWTAFIGLLDVYGFESFPDN 424

  Fly   561 SFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLID-KPGGIMALLD 624
            |.|||||||.||||||.|.......:||||:.||:||.|::: .|.|..:||:: .|..|.:|::
  Rat   425 SLEQLCINYANEKLQQHFVAHYLRAQQEEYEVEGLEWSFVNY-QDNQTCLDLLEGSPISICSLIN 488

  Fly   625 EECWFPKATD----KTFVDKLVSAHSM--HPKFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNM 683
            |||...:.:.    :|.::..::....  |.|..:.     ..|.::|:||.|.|..|..:.||.
  Rat   489 EECRLNRPSSAAQLQTRIESTLAGRPCLGHNKLSRE-----PSFVVMHFAGPVRYCTAGLVEKNK 548

  Fly   684 DPLNENIVSLLQGSQDPFVVNIWKDAEIVGMAQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLM 748
            ||:...:..|||.||||.::.::.      ...:..|..:...::|......||. :|..|.:|:
  Rat   549 DPVPPELTGLLQQSQDPLLMMLFP------ANPEEKTQEELSGQSRAPALTVVSK-FKASLEQLL 606

  Fly   749 DTLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYEL 813
            ..|..|.|:::|||.||.:.:........||:||...|::|.|.|...|||.|:..|.|.:||:|
  Rat   607 QVLHKTTPHYIRCIKPNSQSQPQTFLQEEVLNQLEACGLVETIHISAAGFPIRVSHQNFMERYKL 671

  Fly   814 LT----------PNVIPKGFMDGKKACEK-----------------MIQALELDSN--------L 843
            ||          .::.|......:..|.|                 :||.....|:        |
  Rat   672 LTRLRPRTSSGLRSLCPAKGSSEQPLCAKEATLQPLLQDILHALPALIQTATTPSDPAKTAQIPL 736

  Fly   844 YRVGQSKIFFRAGVLAHLEEERDFKISDLIVNFQAFCRGFLARRNYQKRLQQLNAIRIIQRNCAA 908
            | .|::|||....:|..||..|...:.......|...|    |...||:.:|..|..|||....:
  Rat   737 Y-CGRTKIFMTDSMLELLECGRAQMLEQCARCIQCGWR----RHRLQKQEKQRRAAVIIQAAFRS 796

  Fly   909 YLKLRN--------------WQWWRLYTKVKPLLEVTKQEEKLVQK-----EDELKQVREK---- 950
            :|..::              |..||:........|:...||||:.:     ...|.....:    
  Rat   797 WLTRKHIRRLHIAATVIKHAWHKWRIRMACLASKELDGMEEKLMPQAPGTLRSSLSPAHTRFLGA 861

  Fly   951 ------LDTLAKNTQEYERKYQQALV-------------EKTTLAEQLQAEIELCAEAEESRSRL 996
                  |..:..|:.:..|.:|:.||             .|....:|.||.|.......:...:.
  Rat   862 IIHLWPLGLVLANSADGMRGFQRKLVAHACLRLPASGPSNKVQTPQQDQAGITSIRALPQGSIKF 926

  Fly   997 MARKQELE 1004
            ..||..|:
  Rat   927 HCRKSPLQ 934

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 79..122 CDD:460670 1/1 (100%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 235/764 (31%)
Myosin_tail_1 931..2011 CDD:460256 19/102 (19%)
Myo19NP_001157208.1 MYSc_Myo19 49..746 CDD:276846 239/778 (31%)
IQCD 776..>801 CDD:467745 8/24 (33%)

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