DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and myo6

DIOPT Version :10

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0287873 Length:2056 Species:Drosophila melanogaster
Sequence 2:XP_031758531.1 Gene:myo6 / 493193 XenbaseID:XB-GENE-1012303 Length:1300 Species:Xenopus tropicalis


Alignment Length:1445 Identity:406/1445 - (28%)
Similarity:675/1445 - (46%) Gaps:283/1445 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 VWVPHENQGFVAASIKREHGDEVEVE-LAETGKRVMILRDDIQKMNPPKFD---KVEDMAELTCL 142
            ||.||...||....|.....|.:.:| |.:.||..:.   .|.::.|.:.|   .|||...|..|
 Frog     7 VWAPHPTDGFQLGKIVDIGPDSLTIEPLNQKGKTFLA---PINQVFPAEEDTSKHVEDNCSLMYL 68

  Fly   143 NEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLP-IYTEKIMERYKGIKRHEVPPHVFAITDS 206
            |||::||||:.||....||||.....:.||||..:| :||.:.:::|.|.....:||||:||.|.
 Frog    69 NEATLLHNIQVRYSKDKIYTYVANILIAVNPYFDVPKLYTSEQIKQYHGKSLGTLPPHVYAIADK 133

  Fly   207 AYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLINFSVNTNKY 271
            |:|:|...:..|||:.:||||||||||||.|:::|     ::..|||.                 
 Frog   134 AFRDMKVLKMSQSIIVSGESGAGKTENTKFVLRYL-----TESYGSGQ----------------- 176

  Fly   272 IKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKNDNSSRFGKF 336
                                            ::::::::|||:||||||||||:|:||||||||
 Frog   177 --------------------------------DIDERIVEANPLLEAFGNAKTVRNNNSSRFGKF 209

  Fly   337 IRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFILDDVKSYAFL 401
            :.|:|:....:.|..:..|||||||...|.:|||.:||||:|.|||..:.|:|..|....::.:|
 Frog   210 VEIHFNEKNSVVGGFVSHYLLEKSRICVQGQDERNYHIFYRLCAGAPEDIRQKLFLCSPDTFRYL 274

  Fly   402 S------------------------------NGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNS 436
            :                              :|:|..|.:||:.:|.....:|..:|:...:...
 Frog   275 NRGCTRYFASKDTDKQILQNRKSPEEDEYLKHGALKDPLLDDHGDFNRMCIAMKKIGLDDTEKLD 339

  Fly   437 IFRIVSAVLLFGSMKFRQE---------RNNDQATLPDNTVAQKIAHLLGLSVTDMTRAFLTPRI 492
            :||:|:.||..|::.|.:.         |.....:|      |..|.||||...|: :..||.|:
 Frog   340 LFRVVAGVLHLGNIDFEEAGSTSGGCTLRKKSSESL------QCCAKLLGLDQDDL-QVSLTSRV 397

  Fly   493 KV-----GRDFVTKAQTK-EQVEFAVEAIAKACYERMFKWLVNRINRSLDRTKRQGASFIGILDM 551
            .:     .:..|.|...| :|.|.|.:|:|||.|..:|..:|||:|:..  ...:.:.|||:||:
 Frog   398 MLTTAGGTKGTVIKVPLKVQQAENARDALAKAIYSHLFDHVVNRVNQCF--PFERSSFFIGVLDI 460

  Fly   552 AGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLID-K 615
            ||||.||.|||||.||||.||||||.||..:...|||.||:||:....:.: :|.|..||||: |
 Frog   461 AGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVNEVHY-VDNQDCIDLIEAK 524

  Fly   616 PGGIMALLDEECWFPKATDKTFVDKLVSAHSMH-----PKFMK-TDFRGVAD---FAIVHYAGRV 671
            ..||:.:||||...|:.||:.|...:...|..|     |:..| ...|.:.|   |.:.|:||.|
 Frog   525 LVGILDILDEENRLPQPTDQHFTSAVHQKHKNHFRLTIPRKSKLAVHRNIRDDEGFIVRHFAGAV 589

  Fly   672 DYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGMAQQALTDTQFGARTRKGMFRTV 736
            .|...:::.||.|.|:.::.||:..|:|.||..:::.|.         .......:|.|..|.:|
 Frog   590 CYETTQFVEKNNDALHMSLESLICESKDKFVRELFESAN---------NHKDLKQKTGKLSFISV 645

  Fly   737 SHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNR 801
            .:.:|.||..|::.||:|..:|:|||.||.:..:.:.:...:|.||:|:|::..:.:.:.|||:|
 Frog   646 GNKFKTQLNLLLEKLRSTGSSFIRCIKPNLKMTSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSR 710

  Fly   802 IPFQEFRQRYELLTPNVIPKGFMDGKKACEKMIQALELDSNLYRVGQSKIFFRAGVLAHLEE--- 863
            ..|.|....|:...|..:.:  :|.:..|:.:.:||.|:.|.|:.|.:|:|||.|..|..::   
 Frog   711 ASFHELYNMYKKYMPAKMSR--LDPRLFCKALFKALGLNENDYKFGLTKVFFRPGKFAEFDQIMK 773

  Fly   864 -ERDFKISDLI--VNFQAFCRGFLARRNYQKRLQ--QLNAIRI---IQRNCAAYLKL-RNWQWWR 919
             :.| .:::||  ||....|..:       |::|  .|..|::   ||...:|.:|: :..:.|.
 Frog   774 SDPD-HLAELIRRVNHWLICSRW-------KKVQWCALCVIKLKNKIQYRASACIKMQKTIRMWL 830

  Fly   920 LYTKVKPLLEVTKQEEKLVQKEDELKQV----REKLDTLAKNTQEYERKYQQALVE-KTTL--AE 977
            ...|.||.::...:.:.|.::.|:..:|    :|....::|..::.|......|.: |.|:  .|
 Frog   831 CRKKHKPRIDGMVKVQTLKKRLDKFNEVVNALKEGKAEMSKQVKDLELSIDALLSKIKNTIMTRE 895

  Fly   978 QLQAEIE-LCAEAEESRSRLMARKQELEDMMQELETRIEEEEERVLALGGEKKKLELNIQDLEEQ 1041
            |::.|.: |...:.:..:.|..||:|.|:  .|...:|:||.||      |:|:     ::.||:
 Frog   896 QIEREYDNLVKSSGQLLNSLQKRKKEEEE--AERLHKIQEEMER------ERKR-----REAEEE 947

  Fly  1042 LEEEEAARQKLQLEKVQLDAKIKKYEEDLALTDDQNQKLLK--EKKLLEERAND-LSQTLAEEEE 1103
            |..:|...::|   |.:::||.|:.||:....:::.:::..  |.:|..:|..: ..|.:.|:|.
 Frog   948 LRRKEENERRL---KAEIEAKRKQEEEERKKREEEEKRIQAEVEMQLARDREEESQQQAILEQER 1009

  Fly  1104 KAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRKIETEVADLKEQLNERRVQVDEMQAQL 1168
            :.:.||...|:.||      |.:::|.........:...::....:.|...:..::.::||    
 Frog  1010 RDRELAMRIAQSEA------ELINEDGPDSALRSDTVGVLQPSPVNYKAGEDRTKLTMEEM---- 1064

  Fly  1169 AKREEELTQTLLRIDEESATKATAQKAQRELES-QLAEIQE------DLEAEKAARA-------- 1218
               .:|:|..|.|..:..|||:.|...:.:|.. :.||:::      |:|...|.|.        
 Frog  1065 ---AKEMTDILSRGGQVQATKSAASVKKHDLSKWKYAELRDAINTSCDIELLAACREEFHRRLKV 1126

  Fly  1219 ----KAEKVRRDLSEELEALKN--------------ELLDSLDTTAAQQELRSKREQ---ELATL 1262
                |::..:|:...|..|.|:              :....:...|.|||:...|:|   .:..:
 Frog  1127 YHAWKSKNKKRNADTEQRAPKSVTDYDFAPFMNNSPQQNPVVQLPARQQEIEMNRQQRYFRIPFI 1191

  Fly  1263 KKSLEEETVNHEGVLADMRHKHSQELNS-----------INDQLENLRKAKTVLEKAKGTLEAEN 1316
            :.             || ::|..|....           |..|:| |...|..:....|..:.|.
 Frog  1192 RP-------------AD-QYKDPQNKKKGWWYAHFDGPWIARQME-LHPDKPPIMLVAGKDDMEM 1241

  Fly  1317 ADLATELRSVNSSRQENDRRRKQAESQIAELQVKLAEIERARSELQEKCTKLQQEAENITNQLEE 1381
            .:|..|         |....||:.    ||:      :.|...|:.|:|..:|.    ::|.:|.
 Frog  1242 CELNLE---------ETGLTRKRG----AEI------LPRQFEEIWERCGGIQY----LSNAIES 1283

  Fly  1382 AELKASAAVKSASNM 1396
            .:.:.:.|.....|:
 Frog  1284 RQARPTYATAMLQNL 1298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 79..122 CDD:460670 12/40 (30%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 256/764 (34%)
Myosin_tail_1 931..2011 CDD:460256 106/524 (20%)
myo6XP_031758531.1 Myosin_N 2..40 CDD:460670 11/32 (34%)
MYSc_Myo6 71..761 CDD:276833 256/764 (34%)
CBD_MYO6-like 772..916 CDD:409646 31/151 (21%)
MYO6_MIU_linker 1001..1074 CDD:412090 16/85 (19%)
MyUb_Myo6 1088..1128 CDD:439319 7/39 (18%)
Myosin-VI_CBD 1183..1273 CDD:465157 23/123 (19%)

Return to query results.
Submit another query.