DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and dachs

DIOPT Version :10

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0287873 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_001188730.1 Gene:dachs / 34179 FlyBaseID:FBgn0262029 Length:1426 Species:Drosophila melanogaster


Alignment Length:896 Identity:219/896 - (24%)
Similarity:355/896 - (39%) Gaps:215/896 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 QKM--------NPPKFDKVEDMAELT-CLNEASVLHNIKDRYYSGLIYTYSGLFCVVVNPY---- 174
            |||        :.||  .::|:..|: .|.|.:|:..::.|:.....:|..|...:.:|||    
  Fly   459 QKMQQQQQQGNSSPK--DMQDLIHLSGPLTEHAVMRTLQARFNERRYFTNVGPILLSINPYLDVG 521

  Fly   175 KKLPIYTEKIMERYKGIKRHEVPPHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQ 239
            ..|.:.:.:.|         .:.|.:..|...|.|........|:|:.:|.||||||.|...:::
  Fly   522 NPLTLTSTRAM---------PLAPQLQKIVQEAVRQQSETGYPQAIILSGTSGAGKTANAMLMLR 577

  Fly   240 FLAYVAASKPKGSGAVPHPAVLINFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGE 304
            .|..:|...|                                                    |.:
  Fly   578 QLFAIAGGGP----------------------------------------------------ETD 590

  Fly   305 LEQQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDE 369
            ..:.|..|..:|.:.|:|||..|..|||.|:||.:.. ..|.:....|..|.|:::|.||....|
  Fly   591 AFKHLAAAFTVLRSLGSAKTTTNSESSRIGQFIEVQV-TDGALYRTKIHCYFLDQTRVIRPLPKE 654

  Fly   370 RTFHIFYQLLAGATPEQREKFILDDVK--SYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSE 432
            :.:|||||||||.:.|:|:|..||...  :..:| .|.:.....:|.|.|||....:.|:|:   
  Fly   655 KNYHIFYQLLAGLSREERQKLHLDGYSPANLRYL-RGDIGQNEQEDAARFQAWKTCLGILGI--- 715

  Fly   433 DFNSIFRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAHLLGLSVTDMTRAFLTPRIKVGRD 497
            .|..:.|:::||||.|:::| .:....:..:...|....:|.|||:....:.|...|....|...
  Fly   716 PFLDVVRVLAAVLLLGNVQF-IDGGGLEVDVKGETELNSVASLLGVPPAALFRGLTTRTHNVRGQ 779

  Fly   498 FVTKAQTKEQVEFAVEAIAKACYERMFKWLVNRIN------------------------------ 532
            .|.............:.:|||.|.|....:|.|.|                              
  Fly   780 LVKSVCGDGDANMTRDCLAKALYCRTVATIVRRANSLKRLGSTLGTLSSDSNESVHNQADVASQH 844

  Fly   533 --------------RSLDRTKRQGAS--FIGILDMAGFEIFELNS-FEQLCINYTNEKLQQLFNH 580
                          .:|:...|...|  |||||||.|||....:: .|.||||...|.:|..:|.
  Fly   845 ASTIGGGNAGSKSMAALNNAVRHATSDGFIGILDMFGFEEPSPHAHLEHLCINLCAETMQHFYNT 909

  Fly   581 TMFILEQEEYQREGIEWKF-IDFGLDLQPTIDLIDK-PGGIMALLDEECWFPKATDKTFVDKLVS 643
            .:|....|..:.|||.... :|: :|..|.||||.. ..|::::||.|| ..:.|.:::|.||  
  Fly   910 HIFKSSVESCRDEGIVCDTEVDY-VDNVPCIDLISSLRTGLLSMLDAEC-SVRGTAESYVTKL-- 970

  Fly   644 AHSMHPKFMKTDFRGVAD------FAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFV 702
             ...|....:.:.:..|:      |.|.|:||||:|....:|..|.|.:.:::|.:..    ...
  Fly   971 -KVQHRSSTRLETKPTAEPHDPRMFLIRHFAGRVEYDTTDFLDTNRDVVPDDLVGVFY----KHT 1030

  Fly   703 VNIWKDAEIVGMAQQALTDTQFGARTRKGM-FR-----------------TVSHLYKEQLAKLMD 749
            .|......:.|...:||...|   :..:|: ||                 |::..:..:|..|:.
  Fly  1031 CNFGFATHLFGSELKALYAQQ---QAPRGLSFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLR 1092

  Fly   750 TLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELL 814
            ||.:..|:|||||..|..:.|...|...|:.|:|...|||.:.:...|||:|:.|::|..||.:|
  Fly  1093 TLVHARPHFVRCIRSNGTEAARSFDRATVVRQIRSLQVLETVNLMASGFPHRMRFKQFNARYRML 1157

  Fly   815 TP-NVIPKGFMDGKKACEKMIQ-ALE----LDSNL---YRVGQSKIFFRAGVLAHLEEERDFKIS 870
            .| .::.:......:.|:.::: |:|    ||.::   :..|:..:|...|:..|||.       
  Fly  1158 APFRLLRRSEDKALEDCQLILKYAMEQPPVLDGSVTLAWAPGKRHVFLSEGIRQHLEH------- 1215

  Fly   871 DLIVNFQAFCRGFLARRNYQKRLQQLNAIRIIQRNCAAYLKLRNWQ--WWR 919
                                        :|...|:.:|.|....|:  |||
  Fly  1216 ----------------------------LRTEIRHKSATLMQATWRGWWWR 1238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 79..122 CDD:460670
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 198/796 (25%)
Myosin_tail_1 931..2011 CDD:460256
dachsNP_001188730.1 MYSc_Myo20 488..1206 CDD:276847 198/796 (25%)
IQCD 1219..1250 CDD:467745 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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