DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and syd-2

DIOPT Version :9

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0265434 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_509768.1 Gene:syd-2 / 181255 WormBaseID:WBGene00006364 Length:1139 Species:Caenorhabditis elegans


Alignment Length:1253 Identity:250/1253 - (19%)
Similarity:483/1253 - (38%) Gaps:304/1253 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   927 LLEVTKQEEKLVQKEDELKQVREKLDTLAKNTQEYERK----YQQALVEKTTLAEQLQAEI-ELC 986
            ::.:.:..:||   :::|:..:.:|:.....|:|.|::    .:|..|....|.::||... |||
 Worm    40 MMNMLEDRDKL---QEQLENYKVQLENAGLRTKEVEKERDMMKRQFEVHTQNLPQELQTMTRELC 101

  Fly   987 ------AEAEESRSRLMARKQELEDMMQELETRIEEEEERVLALGGEKKKLELNIQDLEEQLEEE 1045
                  .|.:|....|.|.:.....:::.||..: ...||.|.:...|::.: |...:..::|..
 Worm   102 LLKEQLLEKDEEIVELKAERNNTRLLLEHLECLV-SRHERSLRMTVMKRQAQ-NHAGVSSEVEVL 164

  Fly  1046 EAARQKLQLEKVQLDAKIKK-----------YEEDLALTDDQNQKLLKEK--------------- 1084
            :|.:...:..|. ||.|:::           .||:|:...|:|.. ||.:               
 Worm   165 KALKSLFEHHKA-LDEKVRERLRVAMERVATLEEELSTKGDENSS-LKARIATYAAEAEEAMASN 227

  Fly  1085 -----KLLEERANDLSQTLAEEEEKAKHLA-KLKAKHEATI--SELEERLHKDQQQRQESDRSKR 1141
                 .:..|.||.|.:.....|.....|| .||...|.|.  :|||::|.:|.:::..:..|..
 Worm   228 APINGSISSESANRLIEMQEALERMKTELANSLKQSTEITTRNAELEDQLTEDAREKHAAQESIV 292

  Fly  1142 KIETEVADLKEQLNERRVQVDEMQAQL--AKREEELTQTLL-RIDEESATKATAQKAQRELESQL 1203
            :::.::.:|..|..::..::...:::.  |:||....:.|. :::.:.|.|..|.:..   |.::
 Worm   293 RLKNQICELDAQRTDQETRITTFESRFLTAQRESTCIRDLNDKLEHQLANKDAAVRLN---EEKV 354

  Fly  1204 AEIQEDLE-AEK---AARAKAE---KVRRDLSEELEALKNELLDSLDTTAAQQELRSKRE----- 1256
            ..:||.|| |||   .:..|||   .|..:|.:.:|||          |||:|:..|..|     
 Worm   355 HSLQERLELAEKQLAQSLKKAESLPSVEAELQQRMEAL----------TAAEQKSVSAEERIQRL 409

  Fly  1257 ----QEL-ATLKKSLEEETVNHEGVLADMRHKHSQELNSINDQL--ENLRKAKTVLEKAKGTLEA 1314
                ||| |.|:::::.|.:|.|         |||.|:|..|:|  |:..:.:..|::....|:.
 Worm   410 DRNIQELSAELERAVQRERMNEE---------HSQRLSSTVDKLLSESNDRLQLHLKERMQALDD 465

  Fly  1315 ENADLATEL----RSVNSSRQENDRRRKQAESQIAELQVKLAEIERAR-SELQEKCTKLQ-QEAE 1373
            :|. |..:|    :..:.:.:..||.::..||...|::....::..|| ::.|.:...:. ..|:
 Worm   466 KNR-LTQQLDGTKKIYDQAERIKDRLQRDNESLRQEIEALRQQLYNARTAQFQSRMHAIPFTHAQ 529

  Fly  1374 NITNQLEEAELKASAAVKSASNMESQLTEAQQLLEEETRQKLGLSSKLRQIESEKEALQEQLEED 1438
            ||..|    :.:||.|.:||..|..|....|.......|...|..|.|:...::.:.|.||  |.
 Worm   530 NIVQQ----QPQASIAQQSAYQMYKQQPAQQYQTVGMRRPNKGRISALQDDPNKVQTLNEQ--EW 588

  Fly  1439 DEAKRNYERKLAEVTTQMQEIKKKAEEDADLAKELEEGKKRLNKDIEALERQVKELIAQNDRLD- 1502
            |..::      |.|...:|:....:...||:      |:..|.:...|::.|      |:|.:: 
 Worm   589 DRLQQ------AHVLANVQQAFSSSPSLADV------GQSTLPRPNTAVQHQ------QDDMMNS 635

  Fly  1503 -------------------KSKKKIQSELEDATIELEAQRTKVLELEKKQKNFDKILAEEKAISE 1548
                               :..:.:.|.|:|   .|:|..|::           :::.:||..:|
 Worm   636 GMGMPSGMQGGMQGGMGGGQDAQMLASMLQD---RLDAINTEI-----------RLIQQEKHHAE 686

  Fly  1549 QIAQERDTAEREAREKETKVLSVS-RELDEAFDKIEDL-ENKRKTL------QNELDDLANTQGT 1605
            ::|::.:.:.||..:.:    .:| |....|..::::: ::|..||      ....|...|.|..
 Worm   687 RVAEQLERSSREFYDDQ----GISTRSSPRASPQLDNMRQHKYNTLPANVSGDRRYDIYGNPQFV 747

  Fly  1606 ADKNVHELEKAKRALESQLAELKAQNEELEDDLQLTEDAKLRLEVNMQALRSQFERDLLAKEEGA 1670
            .|:.|.:|:...|...:|..|:                              |:|||.::.....
 Worm   748 DDRMVRDLDYEPRRGYNQFDEM------------------------------QYERDRMSPASSV 782

  Fly  1671 EEKRRGLVKQLRDLETELDEERKQRTAAVASKKKLEGDLKEIETTMEMHNKVKEDALKHAKKLQA 1735
            .....|:                     :..|||.......::|.....|| |:::.....|...
 Worm   783 ASSTDGV---------------------LGGKKKRSNSSSGLKTLGRFFNK-KKNSSSDLFKRNG 825

  Fly  1736 QVKDALRDAEEAKAAKEELQALSKEAERKVKALEAEV-------------LQLTEDLASSERARR 1787
            ...|..:...|.....:..:...|:.|...:|::|..             |:|...:.:...|..
 Worm   826 DYSDGEQSGTEGNQKADYDRRKKKKHELLEEAMKARTPFALWNGPTVVAWLELWVGMPAWYVAAC 890

  Fly  1788 AAETERDELAEEIANNANKGSLMIDEK-RRLEARIATLEEELEEEQSNSEVLLDRSRKAQLQIEQ 1851
            .|..:...:...:::...:..:.|... .||:.|:|     ::|..|.:.....|:.:..|....
 Worm   891 RANVKSGAIMSALSDQEIQKEIGISNPLHRLKLRLA-----IQEMVSLTSPSAPRTARLTLAFGD 950

  Fly  1852 LTTE-----------LANEKSNSQKNENGRALLERQNK-ELKAKLAEIETAQRTKVKATIATL-- 1902
            :..|           ||..:|...:......:||..:| :|:..|..::|..||.::..|..|  
 Worm   951 MNHEYIGNDWLPCLGLAQYRSAFMECLLDARMLEHLSKRDLRTHLRMVDTFHRTSLQYGIMCLKK 1015

  Fly  1903 ----EAKIANLEEQLENEGKERLLQQKANRKMDKKIKELTMNIEDERRHVDQHKEQMDKLNSRIK 1963
                :..:|:..:..:|...:.|:.  :|.::.:.::|:.:.: ..|..||          |.|.
 Worm  1016 VNYDKKVLADRRKACDNINTDLLVW--SNERVQRWVEEIGLGV-FSRNLVD----------SGIH 1067

  Fly  1964 LLKRNLDETEE------ELQKEKTQKRKYQRECEDMIESQEAMNREINSLKTKLRRTGGIGLSSS 2022
            .....||||.:      .||                |.||:..||::  |:.|.     |||.:.
 Worm  1068 GALIALDETFDASAFAYALQ----------------IGSQDVPNRQL--LEKKF-----IGLVND 1109

  Fly  2023 RLTGTPSSKRAGGGGGGD 2040
            ....:....|:|.....|
 Worm  1110 HRQQSDPHPRSGSSRKND 1127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 80..117 CDD:280832
Myosin_head 133..854 CDD:278492
MYSc_Myh2_insects_mollusks 145..854 CDD:276876
Myosin_tail_1 931..2011 CDD:279860 243/1218 (20%)
Prefoldin 1431..1515 CDD:298833 18/103 (17%)
FAM76 <1847..1926 CDD:292665 18/96 (19%)
syd-2NP_509768.1 BAR <323..474 CDD:299863 48/173 (28%)
Ferritin_like <667..>728 CDD:294190 13/75 (17%)
SAM_liprin-alpha1,2,3,4_repeat1 864..934 CDD:188961 11/74 (15%)
SAM 864..930 CDD:197735 9/70 (13%)
SAM_liprin-alpha1,2,3,4_repeat2 951..1016 CDD:188964 14/64 (22%)
SAM 959..1015 CDD:197735 13/55 (24%)
SAM_liprin-alpha1,2,3,4_repeat3 1036..1107 CDD:188967 23/106 (22%)
SAM 1039..1109 CDD:197735 23/105 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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