DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and Myo1f

DIOPT Version :10

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0287873 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_444444.2 Gene:Myo1f / 17916 MGIID:107711 Length:1098 Species:Mus musculus


Alignment Length:995 Identity:296/995 - (29%)
Similarity:485/995 - (48%) Gaps:194/995 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 VEDMAELTCLNEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIKRHEVP 197
            |:||..|..:.|.:::.|::.|:....|:||.|...:.|||:|::|.:|::.::.|:|..::|.|
Mouse    19 VDDMVLLPQITEDAIVSNLRKRFMDDYIFTYIGSVLISVNPFKQMPYFTDREIDLYQGAAQYENP 83

  Fly   198 PHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLI 262
            ||::|:||:.|||||.|.|:|.::.:||||||||...|.::.:::.|:.    |...|.|     
Mouse    84 PHIYALTDNMYRNMLIDCENQCVIISGESGAGKTVAAKYIMGYISKVSG----GGDKVQH----- 139

  Fly   263 NFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKN 327
                                                      ::..:||:||:||||||||||:|
Mouse   140 ------------------------------------------VKDIILQSNPLLEAFGNAKTVRN 162

  Fly   328 DNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFIL 392
            :|||||||:..|.|...|...|..|..:||||||.:.|.::||.|||:||||.||:.||::...|
Mouse   163 NNSSRFGKYFEIQFSRGGEPDGGKISNFLLEKSRVVMQNENERNFHIYYQLLEGASQEQQQNLGL 227

  Fly   393 DDVKSYAFLS-NGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQER 456
            .....|.:|: :.:..|.|.||.::|..|:.:|.::|:.:.....:.::|:.:|..|::.|.:|.
Mouse   228 MTPDYYYYLNQSDTYKVEGTDDRSDFSETLSAMQVIGIPTSVQQLVLQLVAGILHLGNISFCEEG 292

  Fly   457 NN------DQATLPDNTVAQKIAHLLGLSVTDMTRAFLTPRIKV-----GR-DFVTKAQTKEQVE 509
            |.      |....|        |:|||:. :...:..||.| |:     || :.:......||..
Mouse   293 NYARVESVDLLAFP--------AYLLGID-SGRLQEKLTSR-KMDSKWGGRSESIDVTLNVEQAA 347

  Fly   510 FAVEAIAKACYERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKL 574
            :..:|:||..|.|:|.:||..|||::.:.:.:.:  ||:||:.|||||:.|.|||.|||:.||||
Mouse   348 YTRDALAKGLYARLFDFLVEAINRAMQKPQEEYS--IGVLDIYGFEIFQKNGFEQFCINFVNEKL 410

  Fly   575 QQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLID---KPGGIMALLDEECWFPKAT--- 633
            ||:|.......|||||.:|||.|..|:: .:.:...|||:   .|.|||::||:.|....||   
Mouse   411 QQIFIELTLKAEQEEYVQEGIRWTPIEY-FNNKIVCDLIENKLSPPGIMSVLDDVCATMHATGGG 474

  Fly   634 -DKTFVDKLVSAHSMHPKFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGS 697
             |:|.:.||.:|...|..|....    |.|.|.||||:|.|..:.:..:|.|.|..:::.|:|.|
Mouse   475 ADQTLLQKLQAAVGTHEHFNSWS----AGFVIHHYAGKVSYDVSGFCERNRDVLFSDLIELMQSS 535

  Fly   698 QDPFVVNIWKDAEIVGMAQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFVRCI 762
            ...|:..::.:...:               .:||...|.....|:|...|:.||:...|:::|||
Mouse   536 DQDFLRMLFPEKLNI---------------DKKGRPSTAGSKIKKQANDLVSTLKKCTPHYIRCI 585

  Fly   763 IPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELLTPNVIPKGFMDGK 827
            .||..||....:...|..|:...|:.|.||:.|.||..|..|.:|.|||.:|||...|:...|.:
Mouse   586 KPNETKRPRDWEESRVKHQVEYLGLRENIRVRRAGFAYRRQFSKFLQRYAILTPETWPRWRGDER 650

  Fly   828 KACEKMIQALELDSNLYRVGQSKIFFR-AGVLAHLEEERDFKISDLIVNFQAFCRGFLARRNYQK 891
            :..:.:::|:.::.:.|::|.:|:|.: ...|..|||.|:.|........|...|..:|.|.|::
Mouse   651 QGVQHLLRAVNMEPDQYQMGSTKVFVKNPESLFLLEEMRERKFDGFARTIQKAWRRHVAVRKYEE 715

  Fly   892 RLQQLNAIRI---------IQRNCAA-YLKLRNWQWWRLYTKVKPLLEVTKQEEKLVQKEDELKQ 946
            ..::.:.|.:         |.||... ||.|                          ::..||:|
Mouse   716 MREEASNILLNKKERRRNSINRNFVGDYLGL--------------------------EERPELRQ 754

  Fly   947 V---REKLDTLAKNTQEYERKY---QQALV------------------EKTTLAEQLQAEIELCA 987
            .   ||::| .|.:..:|:|::   ::.|:                  ||..:.|.|:.::::  
Mouse   755 FLAKRERVD-FADSVTKYDRRFKPIKRDLILTPKCVYVIGREKVKRGPEKGLVREVLKKKLDI-- 816

  Fly   988 EAEESRSRLMARKQELEDMMQE------LETRIEEEEERVLALGGEKKKLELNIQDLEEQLEEEE 1046
              :..|...::.:|:...::||      ||:..:.|...:|.     |:.             ||
Mouse   817 --QALRGVSLSTRQDDFFILQEEAADSFLESIFKTEFVSLLC-----KRF-------------EE 861

  Fly  1047 AARQKLQLE-KVQLDAKIKK 1065
            |||:.|.|. ...|..::||
Mouse   862 AARRPLPLTFSDLLQFRVKK 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 79..122 CDD:460670
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 240/728 (33%)
Myosin_tail_1 931..2011 CDD:460256 33/166 (20%)
Myo1fNP_444444.2 MYSc_Myo1 31..677 CDD:276829 240/728 (33%)
Myosin_TH1 717..915 CDD:461801 40/214 (19%)
PHA03247 <920..1043 CDD:223021
SH3_MyoIe_If_like 1045..1097 CDD:212761
Blue background indicates that the domain is not in the aligned region.

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