DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and myo-6

DIOPT Version :10

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0287873 Length:2056 Species:Drosophila melanogaster
Sequence 2:NP_001022590.1 Gene:myo-6 / 176764 WormBaseID:WBGene00009730 Length:1235 Species:Caenorhabditis elegans


Alignment Length:1327 Identity:505/1327 - (38%)
Similarity:768/1327 - (57%) Gaps:137/1327 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 DPELKYLSVERNQFNDPATQAEWTQKRLVWVPHENQGFVAASIKREHGDEVEVELAETGKRVMIL 118
            ||..|||...:::.........:..|...|||...:|||.|::..:.||.:...:.: |....:.
 Worm     9 DPGWKYLRQAQDEALKEQAARRFDNKTHAWVPDAAEGFVTAAVAVQEGDNLTFTMPD-GTPKKLT 72

  Fly   119 RDDIQKMNPPKFDKVEDMAELTCLNEASVLHNIKDRYYSGLIYTYSGLFCVVVNPYKKLPIYTEK 183
            |.::|::||.||:|.|||:.||.|||||||||::.||||.:||||||||||.:||||.|||||:.
 Worm    73 RAEVQEINPAKFEKTEDMSNLTFLNEASVLHNLRQRYYSMMIYTYSGLFCVFINPYKMLPIYTDS 137

  Fly   184 IMERYKGIKRHEVPPHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASK 248
            :...|...:|.|:|||:||::|.|:|||:.|:|:||:|.||||||||||||||||.:.|.:    
 Worm   138 VASMYVNKRRAEMPPHLFAVSDEAFRNMMSDKENQSMLITGESGAGKTENTKKVIAYFAMI---- 198

  Fly   249 PKGSGAVPHPAVLINFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQAN 313
              |||                          |::|.                .|..||.|::|||
 Worm   199 --GSG--------------------------NKDQK----------------SESSLENQVVQAN 219

  Fly   314 PILEAFGNAKTVKNDNSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQL 378
            |.:|||||..|.:|.||||:||||||:||..|.:.|.:||.|||||||.|:||..||::|||||:
 Worm   220 PAIEAFGNGATTRNYNSSRYGKFIRIHFDRKGKLVGGDIEHYLLEKSRVIKQAPGERSYHIFYQI 284

  Fly   379 LAGATPEQREKF-ILDDVKSYAFLSNGSLPVPGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVS 442
            :  .....||:: :.|:::.|.|:|...:.|||::|..|:|.|..:.|:||.:..:.:.::::.|
 Worm   285 M--TQKALRERYGLSDNIRDYKFVSQAEITVPGMNDTEEWQITDGAFNVMGFSEREKDDLYKLCS 347

  Fly   443 AVLLFGSMKFRQERNNDQATLPDNTVAQKIAHLLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQ 507
            |::..|:..|:|:..::||.:.|.|.......|.|::......|...||||||.::|.|.|..:|
 Worm   348 AIMHIGNSTFKQKPRDEQAEVDDMTSPTAACKLFGINTDQFLNALTRPRIKVGMEWVNKGQNVQQ 412

  Fly   508 VEFAVEAIAKACYERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNE 572
            |::||.|::||.|.|||.||:.|:|::|.....:...:||:||:||||||:.||||||.||:.||
 Worm   413 VDWAVGALSKAIYARMFNWLIKRVNKTLQANSDEMVYYIGVLDIAGFEIFDRNSFEQLWINFVNE 477

  Fly   573 KLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPGGIMALLDEECWFPKATDKTF 637
            ||||.|||.||:|||||||||||||.|||||||||..|:||:||.||:::|||||..|||:|.|:
 Worm   478 KLQQFFNHHMFVLEQEEYQREGIEWTFIDFGLDLQSCIELIEKPLGIVSMLDEECIVPKASDMTY 542

  Fly   638 VDKLVSAH-SMHPKFMKT----DFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGS 697
            ||||::.| ..||.|.|.    ..:..|.|:|:||||.|.|:|.:||.||.||||::.|::|:.|
 Worm   543 VDKLLTQHLGKHPNFQKAKPPKGKQAEAHFSIMHYAGTVRYNAEQWLDKNKDPLNDSAVAILKTS 607

  Fly   698 -QDPFVVNIW---------KDAEIVGMAQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLMDTLR 752
             ::..:..:|         :::|..|.||..       .:.:...|.|||.:|:|.|..||..|.
 Worm   608 DKEGVLYQLWEEYQTDVDREESEKRGKAQAK-------KKGKSASFLTVSTMYRESLTSLMTMLH 665

  Fly   753 NTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYELLTPN 817
            .|:|:|:||||||.:|.:|.|||||||:||.||||||||||||:|||||:.|.:||.||.:|..:
 Worm   666 TTHPHFIRCIIPNEKKTSGLIDAPLVLNQLTCNGVLEGIRICRKGFPNRMMFADFRFRYAILAAD 730

  Fly   818 VIPKGFMDGKKACEKMIQAL----ELDSNLYRVGQSKIFFRAGVLAHLEEERDFKISDLIVNFQA 878
              .....|..||.:.|::.|    :|:.:.::||.:|:|||||:||.|||.||..:|.:|:.||.
 Worm   731 --EASDKDAAKASKAMLRKLSKNNQLNVDTFKVGTTKVFFRAGMLARLEELRDEALSAVILKFQC 793

  Fly   879 FCRGFLARRNYQKRLQQLNAIRIIQRNCAAYLKLRNWQWWRLYTKVKPLLEVTKQEEKLVQKEDE 943
            ..|.:||:..|::||.:.:|..|||.|..|::|||:|.|:||::::||:|:..|...::...|.:
 Worm   794 SLRHYLAQLEYKRRLDREDAYPIIQENIRAWIKLRSWPWYRLFSRLKPMLKGMKSNAEIEALEKK 858

  Fly   944 LKQVREKLDTLAKNTQEYERKYQQALVEKTTLAEQLQAEI----ELCAEAEESRSRLMARKQELE 1004
            .|::.|.    .|..:|..:||          |::|:|:|    |..|..|..|..|..|.:|:|
 Worm   859 CKELEEN----HKREEEARKKY----------ADELRAKIDQYEETKAAHERDRMLLDKRNKEIE 909

  Fly  1005 DMMQELETRIEEEEERV-----LALGGEKKKLELNIQDLEEQLE-EEEAARQKLQLEKVQLDAKI 1063
            ::.:.|:...|...|..     |....||:|.|.:.::...|:| |.||.:.|.|.||  |..:|
 Worm   910 ELNRNLKAESESNYENAKKASELERLREKEKKEWDEKERRMQMEAENEANQHKTQTEK--LKDQI 972

  Fly  1064 KKYEEDLALTDDQNQKLLKEKKLLEERANDLSQTLAEEEEKAKHLAKLKAKHEATISELEERLHK 1128
            ...:.|.       :|:..::|..|:...:|...:|..::||:...:.|.|....:..|:::|..
 Worm   973 STLQTDF-------EKVSAQRKAQEQMNAELVDEVASFKQKAERAEEQKKKLVEDLDSLDDKLAA 1030

  Fly  1129 DQQQRQESDRSKRKIETEVADLKEQLNERRVQVDEMQAQLAKREEELTQTLLRIDEESATKATAQ 1193
            :::...|..:..:|:|.::...:.||.....:..|......:||.|:.:..|:...::...:..|
 Worm  1031 EKRANNEHVKHNKKLEGQLKATQTQLTLALKEKHEFDVDCKRRESEIGELKLKAQGDANLISKLQ 1095

  Fly  1194 KAQRELESQLAEIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRSKREQE 1258
            ...|:..|::.|::|||..|:..|.|||:...:|..|.|.|:.::.::.....|:..:...|.:|
 Worm  1096 AMLRKCISRIEELEEDLLEERKLRMKAERQFNELRSEYEVLQEQMAEASGQLTAEAHINKVRAEE 1160

  Fly  1259 LATLKKSLEEETVNHEGVLADMRHKHSQELNSINDQLENLRKAKTVLEKAKGTLEAENADLATEL 1323
            ::.|::.|::..:|||..::|:.:.....:|       |||.    |.:...|||:|      .|
 Worm  1161 VSNLRRDLQKRNLNHEAYISDLCNMQYATVN-------NLRN----LSQQSATLESE------AL 1208

  Fly  1324 RSVNSSRQENDRRRKQAESQIAELQVK 1350
            |.:       |.||..::..:..:.|:
 Worm  1209 RIL-------DHRRALSKQPLPRVYVE 1228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 79..122 CDD:460670 12/42 (29%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 336/728 (46%)
Myosin_tail_1 931..2011 CDD:460256 101/430 (23%)
myo-6NP_001022590.1 Myosin_N 32..>67 CDD:460670 10/35 (29%)
MYSc_class_II 99..769 CDD:276951 336/728 (46%)
Myosin_tail_1 855..>1206 CDD:460256 93/384 (24%)

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