DRSC/TRiP Functional Genomics Resources

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Protein Alignment zip and myo1d

DIOPT Version :10

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0287873 Length:2056 Species:Drosophila melanogaster
Sequence 2:XP_002935562.1 Gene:myo1d / 100497691 XenbaseID:XB-GENE-5877220 Length:1007 Species:Xenopus tropicalis


Alignment Length:954 Identity:311/954 - (32%)
Similarity:466/954 - (48%) Gaps:187/954 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 EVELAETGKRVMILRDDIQKMNPPKFDKVEDMAELTCLNEASVLHNIKDRYYSGLIYTYSGLFCV 169
            |.|..:.||...:|.|.:   ..|:|                 :.|:|.|:..|.|||:.|...|
 Frog     3 EQEGLQFGKADFVLMDSV---TLPEF-----------------MENLKLRFEKGRIYTFIGEVVV 47

  Fly   170 VVNPYKKLPIYTEKIMERYKGIKRHEVPPHVFAITDSAYRNMLGDREDQSILCTGESGAGKTENT 234
            .|||||.||||....:|:|||.:.:|.|||:|:|.|:||:.|....:|..|:.:|||||||||.:
 Frog    48 SVNPYKNLPIYGRDTIEQYKGRELYERPPHLFSIADAAYKAMKRRCKDTCIVISGESGAGKTEAS 112

  Fly   235 KKVIQFLAYVAASKPKGSGAVPHPAVLINFSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSN 299
            |.::|::|           |:.:|:                                        
 Frog   113 KYIMQYIA-----------AITNPS---------------------------------------- 126

  Fly   300 CQEGELEQ---QLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDASGFISGANIETYLLEKSR 361
             |..|:|:   .||::|.:|||||||||.:|||||||||::.||||..|...|.:|..|||||||
 Frog   127 -QRAEVERVKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGHISNYLLEKSR 190

  Fly   362 AIRQAKDERTFHIFYQLLAGATPEQ--REKFILDDVKSYAFLSNGSLPVPGVDDYAEFQATVKSM 424
            .|.|...||.||.|||::.|| |||  |...:..|:..||:..:.:......:|..:|:...::|
 Frog   191 VIVQQLGERNFHSFYQMILGA-PEQTLRSLHLQKDISLYAYTRSLAQLKSSNNDTGDFKDVAEAM 254

  Fly   425 NIMGMTSEDFNSIFRIVSAVLLFGSMKFRQERNNDQATLPDNTVAQKIAHLLGLSVTDMTRAFLT 489
            .::|...|:..::::|::|:|..|::||  ..:.|...:.:..|...:|.|||.....:.:|.|.
 Frog   255 KVIGFKPEEIQTVYKILAAILHLGNLKF--VLDGDTTLIENGKVISVVADLLGTRSEQVEKALLF 317

  Fly   490 PRIKVGRDFVTKAQTKEQVEFAVEAIAKACYERMFKWLVNRINRSLDRTKRQGASF------IGI 548
            ..:..|||.:.|..|:::..:..:|.|||.|||:|.|:|||||..:| .|:|.|:.      ||:
 Frog   318 RTVATGRDVIDKQHTEKEANYGRDAFAKAIYERLFCWIVNRINDVID-VKQQDAALHGKNTVIGV 381

  Fly   549 LDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWKFIDFGLDLQPTIDLI 613
            ||:.|||||:.|||||.||||.||||||||...:...||.|||||||.||.||: .|.|..:||:
 Frog   382 LDIYGFEIFDNNSFEQFCINYCNEKLQQLFIQLVLTQEQAEYQREGIPWKHIDY-FDNQIIVDLV 445

  Fly   614 DKP-GGIMALLDEECW-FPKATDKTFVDKL-----VSAHSMHPKFMKTD--FRGVADFAIVHYAG 669
            ::. .||:||||:.|. ..|.||..|::.|     ..||....|...||  .....||.|.||||
 Frog   446 EQQHRGIIALLDDACMNVGKVTDNMFLEALDKQLGKHAHYSSRKVCATDKALEYNRDFRIRHYAG 510

  Fly   670 RVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAEIVGMAQQALTDTQFGARTRKGMFR 734
            .|.||...::.||.|.|.::...|:..|.:..:..:|.:.::      ::|:.     |::.:  
 Frog   511 DVVYSVVGFIDKNKDTLFQDFKRLMFNSSNAVLKAMWPEGKL------SITEV-----TKRPL-- 562

  Fly   735 TVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNHEKRAGKIDAPLVLDQLRCN------GVLEGIRI 793
            |.:.|:|..:..|:|.|.:..|.:||||.||.:|      :|.:.|::||.      |:||.:|:
 Frog   563 TAATLFKNSMIALVDNLASKEPYYVRCIKPNEKK------SPALFDEVRCKHQVEYLGLLENVRV 621

  Fly   794 CRQGFPNRIPFQEFRQRYELLTPNVIPKGFMDGKK-ACEKMIQALELDSNLYRVGQSKIFFRA-G 856
            .|.||..|..:::|..||:|::....|...:...: |.|:.:....|:.:. ..|::|||.|. .
 Frog   622 RRAGFAYRQVYEKFLHRYKLISSLTWPNHSLPSDRIAVERFMVDCGLNHDA-AYGKTKIFIRTPR 685

  Fly   857 VLAHLEEERDFKISDLIVNFQAFCRGFLARRNYQKRLQQLNAIRIIQR-NCAAYLK--------- 911
            .|..|||.|...:..:|:..|...||.||||..::....|..:|..:| ...:||:         
 Frog   686 TLFFLEERRSEMLIRIILFLQKLWRGTLARRRCKRIRAGLTILRYYRRYKVKSYLREVMHRFNGV 750

  Fly   912 ------------------LRNWQ--------WWRLYTKVK--PLLEVTKQEEKLVQKEDELKQVR 948
                              ||.:|        .||.|..::  |..|:.|...|:...|: ||..|
 Frog   751 KNSRDYGKHVKWPTPPKVLRRFQEALQHIYNRWRGYQIIRSLPPAEIPKVRAKVAAFEN-LKGHR 814

  Fly   949 EKL---------------------DTLAKNTQEYER--KYQQAL 969
            ..:                     |.....:.|.:|  |:.|||
 Frog   815 VDMGLQRCWEGSYLALNQENGRDSDLFVSRSSELQRKDKFMQAL 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 79..122 CDD:460670 6/16 (38%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 263/735 (36%)
Myosin_tail_1 931..2011 CDD:460256 13/62 (21%)
myo1dXP_002935562.1 MYSc_Myo1 24..682 CDD:276829 264/751 (35%)
Myosin_TH1 803..1004 CDD:461801 12/57 (21%)

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