DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment zip and myo5b

DIOPT Version :10

Sequence 1:NP_523860.2 Gene:zip / 38001 FlyBaseID:FBgn0287873 Length:2056 Species:Drosophila melanogaster
Sequence 2:XP_031750785.1 Gene:myo5b / 100379760 XenbaseID:XB-GENE-988439 Length:1835 Species:Xenopus tropicalis


Alignment Length:2046 Identity:545/2046 - (26%)
Similarity:908/2046 - (44%) Gaps:424/2046 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 WTQKRLVWVPHENQGFVAASIKREH--GDEVEVELAETGKRVMILRDDIQKM----NPPKFDKVE 134
            ::|...||:|.....:.:|.|.:::  ||: .::|....:.|:..|.|...:    ||.......
 Frog     7 YSQYTRVWIPDPEDVWRSAEIIKDYKEGDK-SLQLKLEDESVIQHRVDPNNLPHLRNPDILVGEN 70

  Fly   135 DMAELTCLNEASVLHNIKDRYY-SGLIYTYSGLFCVVVNPYKKLPIYTEKIMERYKGIKRHEVPP 198
            |:..|:.|:|.:||||:|.|:. |..||||.|:..|.:|||::||:|.|.::..|.|....::.|
 Frog    71 DLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYQQLPVYGEDVIYAYSGQNMGDMDP 135

  Fly   199 HVFAITDSAYRNMLGDREDQSILCTGESGAGKTENTKKVIQFLAYVAASKPKGSGAVPHPAVLIN 263
            |:||:.:.||:.|..|.::|||:.:||||||||.:.|..:::.|.|..|                
 Frog   136 HIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRYFATVGGS---------------- 184

  Fly   264 FSVNTNKYIKVKIMAQNQNQTIEVVNGLKMVEVNSNCQEGELEQQLLQANPILEAFGNAKTVKND 328
                                                ..|..:|:::|.::||:||.|||||.:||
 Frog   185 ------------------------------------ASEANVEEKVLASSPIMEAIGNAKTTRND 213

  Fly   329 NSSRFGKFIRINFDASGFISGANIETYLLEKSRAIRQAKDERTFHIFYQLLAGATPEQREKFILD 393
            |||||||:|:|.||....|.|||:.||||||||.:.||..||.:||||||.|.|:..:..:..|.
 Frog   214 NSSRFGKYIQIGFDKRYHIIGANMRTYLLEKSRVVFQADMERNYHIFYQLCASASLPEFSELSLA 278

  Fly   394 DVKSYAFLSNGSLPV-PGVDDYAEFQATVKSMNIMGMTSEDFNSIFRIVSAVLLFGSMKFRQERN 457
            :.:.:.:.:.|..|| .||||..:|:.|.::..::|:.......||:||:::|..|::..:.||.
 Frog   279 EAEEFFYTNQGGDPVIDGVDDAEDFEKTRQAFTLLGVKETHQMGIFKIVASILHLGNVAIQTERE 343

  Fly   458 NDQATLPDNTVAQKIAH---LLGLSVTDMTRAFLTPRIKVGRDFVTKAQTKEQVEFAVEAIAKAC 519
            .:...|....  :.:.|   ||||....|.......::....:...|..:.||...|..|:||..
 Frog   344 GESCNLSKGD--KHLTHFCSLLGLEQDQMQHWLCHRKLVTTSETYVKTMSAEQAVNARNALAKHI 406

  Fly   520 YERMFKWLVNRINRSLDRTKRQGASFIGILDMAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFI 584
            |.::|.|:|..:|::|..|.:| .||||:||:.|||.||:|||||.||||.||||||.||..:|.
 Frog   407 YAQLFNWIVQHVNKALHTTIKQ-HSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFK 470

  Fly   585 LEQEEYQREGIEWKFIDFGLDLQPTIDLIDKPGGIMALLDEECWFPKATDKTFVDKLVSAHSMHP 649
            ||||||.:|.|.|..||| .|.||.||||:...||:.||||||..||.||:.:..||...|....
 Frog   471 LEQEEYMKEQIPWTLIDF-YDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHGSSQ 534

  Fly   650 KFMKTDFRGVADFAIVHYAGRVDYSAAKWLMKNMDPLNENIVSLLQGSQDPFVVNIWKDAE---- 710
            .|.|.....|| |.:||:|.:|:|....:|.||.|.:.|..:::|:.|:.|.|.:::::.:    
 Frog   535 HFKKPRMSNVA-FIVVHFADQVEYQCDGFLEKNRDTVYEEQINILKASKYPLVADLFQNEKDTVP 598

  Fly   711 ---------IVGMAQQALTDTQFGARTRKGMFRTVSHLYKEQLAKLMDTLRNTNPNFVRCIIPNH 766
                     .|..|:.||..      ..|...:||.|.::..|..||:||..|.|::||||.||.
 Frog   599 PTPTGKSKISVRPAKPALKS------ANKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPND 657

  Fly   767 EKRAGKIDAPLVLDQLRCNGVLEGIRICRQGFPNRIPFQEFRQRYE-LLTPNVIPKGFMDGKKAC 830
            .|.:...|....:.|||..||||.|||...|:|:|..:.:|..||. |:....|..|  |.|..|
 Frog   658 YKESFSFDPKRAVQQLRACGVLETIRISAAGYPSRWTYHDFFNRYRVLMKKKDISLG--DKKVIC 720

  Fly   831 EKMIQALELDSNLYRVGQSKIFFRAGVLAHLEEERDFKISDLIVNFQAFCRGFLARRNYQKRLQQ 895
            :.:::.|..|.:.::.|::|||||||.:|:||:.|..|.....:..|...||:|.|..| :|:::
 Frog   721 KNVLENLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQRVKY-RRMKK 784

  Fly   896 LNAIRIIQRNCAAYLKLRNWQWWRLYTKVKPLLEVTKQEEKLVQKEDELKQVREKLDTLAKNTQE 960
              |...|||....:|..|    ..|:.::.......:::.::::.....::.|:...|:...|:.
 Frog   785 --AAVTIQRYTRGHLARR----LALHLRMTKAAITFQKQFRMIRVYRGFQKTRKAAVTIQSYTRG 843

  Fly   961 --YERKYQQ-------ALVEK---TTLAEQLQAEIELCAEAEESRSRLMARKQELEDMMQELETR 1013
              ..|.|:|       |:::|   ...|.:|.::....|...:...|.|..::||:.:  ::|.|
 Frog   844 MFVRRAYRQLLEQHKAAIIQKHWRGWRARKLFSKFRSAAVVIQCYFRRMKARRELKQL--KIEAR 906

  Fly  1014 IEEEEERVLALGGEKKKLELNIQDLEEQLEEEEAARQKLQLEKVQLDAKIKKYEEDLALTDDQNQ 1078
            ..|..:: |::|.|.|                          .|||..|:          |:|| 
 Frog   907 TAEHFKK-LSVGMENK--------------------------VVQLQRKL----------DEQN- 933

  Fly  1079 KLLKEKKLLEERANDLSQTLAEEEEKAKHLAKLKAKHEATISELEERLHKDQQQRQESDRSKRKI 1143
               ||:|.|:|:....:.|.|.|.||                 |::.|.| |:|.|:.:.....:
 Frog   934 ---KEQKDLKEQLVSATSTHAVEVEK-----------------LQKELEK-QRQAQQDENQLTSL 977

  Fly  1144 ETEVADLKEQL----NERRVQVDEMQAQLAKREEELTQTLLRIDEESATKATAQKAQRELESQLA 1204
            :.|:..|:|:|    :|::|..|    .|...:|:|.|.:..::||:.                 
 Frog   978 QQELEALREELAKAYSEKKVVED----TLMNEKEQLLQRVSELEEENT----------------- 1021

  Fly  1205 EIQEDLEAEKAARAKAEKVRRDLSEELEALKNELLDSLDTTAAQQELRSKREQELATLKKSLEEE 1269
                                 :|.||.|.|.|:::           |||:.|...:|:|::||  
 Frog  1022 ---------------------NLKEEKEELSNKII-----------LRSEDEFTQSTIKENLE-- 1052

  Fly  1270 TVNHEGVLADMRHKHSQELNSINDQLENLRKAKTVLEKAKGTLEAENADLATELRSVNSSRQEND 1334
                  :..|:..:.|:.        :||.|..|.||:....|:.|          ||..:|:..
 Frog  1053 ------IKKDLEEERSRH--------QNLVKEYTRLEQRYDNLKEE----------VNIIKQQMP 1093

  Fly  1335 RRRKQAESQIAELQVKLAEIERARSELQEKCTKLQQEAENITNQLEEAELKASAAVKSASNMESQ 1399
            ..|:...:|        :.:| :.|......|....:.|:...::|||.|:.:|       |:..
 Frog  1094 GHRRNPSNQ--------SSLE-SDSNYPSISTSEIGDTEDTIKEVEEAGLEKAA-------MDMS 1142

  Fly  1400 LTEAQQLLEEETRQKLGLSSKLRQIESEKEALQEQLEEDDEAKRNYERKLAEVTTQMQEIKKKAE 1464
            |.             |.|..::|::|.|::.||.||::    |...|.|.::|.....|:  .|:
 Frog  1143 LF-------------LKLQKRVRELELERKKLQSQLDK----KEQQENKKSQVIDTTNEV--IAD 1188

  Fly  1465 EDADLA------KELEEGKKRLNKDIEALERQVKELIAQNDRLDKSKKKIQSELEDATIELEAQR 1523
            .|.|:|      :|||...|:|..|:..:.:.:.:........:.....:.::|:.|..||:.::
 Frog  1189 RDTDIAYNNLKRQELESENKKLKNDLNEMRKTIADGAVDGSSEEARIAMLLNQLKSAHEELDVRK 1253

  Fly  1524 TKVLELE------KKQKNFDKILAEE-------KAISEQIAQE--RDTAEREAREKETKVLSVSR 1573
            .:||.|.      .:||..::|::.|       |.:.|..|.|  ....|...:.::...|:...
 Frog  1254 EEVLMLRTQIVKAAQQKESERIMSSEASWPNSNKEMDEDDAIEAYHGVCETNRKTQDWGYLNEDG 1318

  Fly  1574 ELDEAFDKIEDLENKRKTLQNELDDLANTQGTADKNVHELEKAKRALESQLAELKAQNEELEDDL 1638
            ||..|:   :.|:...:.|:.:|      |..:.::..|:|.....::|...||:.|.:.|...|
 Frog  1319 ELGLAY---QGLKQVARLLEAQL------QAQSRQHDEEVEILTSHIDSLKEELEKQQQVLLQAL 1374

  Fly  1639 QLTEDAKLRLEVNMQALRSQFE----RDLLAKEEGAEEKRRGLVKQLR-------DLETELDEER 1692
            ||:.:|::...:..:..|...|    ::||.|.|..|:|   |.|||:       |.|..:..||
 Frog  1375 QLSPEAQVEFGLQHEITRLTNENLDLKELLEKSEKNEKK---LKKQLKTYMKKGQDSEDVVQTER 1436

  Fly  1693 KQRTAAVASKKKLEGDLKEIETTMEMHNKVKEDALKHAKKLQAQVKDALRDAEEAKAAKEELQAL 1757
            |.......:.:::|   |:.:..:|.:   ||:.....:.|...||            .|::.::
 Frog  1437 KPELTRQVTVQRIE---KDFQGMLEYY---KEEEPLLVRNLIIDVK------------PEQMSSM 1483

  Fly  1758 SKEAERKVKALEAEVLQLTEDLASSERARRAAETERDELAEEIANNANKGSLMIDEKRRLEARIA 1822
                   |..|.|.:|.:.        .|.|.....|:....:..:...|...:.:|...|.:|.
 Frog  1484 -------VPCLPAYILFMC--------IRHADYINDDQKVHSLLTSTINGIKKVLKKHHSEFQIT 1533

  Fly  1823 T------------LEEELEEE---QSNS-----------------EVLLDRSRKAQLQIEQLTTE 1855
            :            |::...:|   .|||                 :||.|.|    :||.|...:
 Frog  1534 SFWLSNSSRLLHCLKQYSGDEGFMTSNSPKQNEHCLRNFDLTEYRQVLSDLS----IQIYQQMIK 1594

  Fly  1856 LANEKSNSQKNENGRALLERQNKELKAKLAEIETAQRTKVKA---TIATLEAKIANL---EEQLE 1914
            :|..........   |:||.::.:..:.:.:....:||...|   ...:|||.|..|   ...:.
 Frog  1595 IAETHMQPMIVS---AMLETESIQGLSGVKQTGYRKRTSSMADGDNSYSLEAVIRQLNTFNSIMC 1656

  Fly  1915 NEGKERLLQQKANRKMDKKIKELTMNIEDERRHVDQHKEQMDKLNSRIKLLKRNLDETEEELQKE 1979
            :.|.:..:.|:..:::...|..:|:|....|:.|......|.        |:.|:.:.||.|:.:
 Frog  1657 DHGLDPEIIQQVFKQLFYMINAVTLNNLLLRKDVCSWSTGMQ--------LRYNISQLEEWLRGK 1713

  Fly  1980 KTQKRKYQRECEDMIESQEAMNREINSLKTK 2010
            ........:..|.:|::.:.:     .||.|
 Frog  1714 NLHPSGAAQTMEPLIQAAQLL-----QLKKK 1739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
zipNP_523860.2 Myosin_N 79..122 CDD:460670 10/44 (23%)
MYSc_Myh2_insects_mollusks 145..854 CDD:276876 268/727 (37%)
Myosin_tail_1 931..2011 CDD:460256 236/1166 (20%)
myo5bXP_031750785.1 MYSc_Myo5 81..744 CDD:276831 268/727 (37%)
IQ 758..780 CDD:197470 7/22 (32%)
IQ 781..800 CDD:197470 6/20 (30%)
IQCD 851..880 CDD:467745 5/28 (18%)
Smc <895..>1465 CDD:440809 166/762 (22%)
Myo5b_CBD 1461..1832 CDD:271261 59/326 (18%)

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