DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3829 and SCARB2

DIOPT Version :9

Sequence 1:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_005497.1 Gene:SCARB2 / 950 HGNCID:1665 Length:478 Species:Homo sapiens


Alignment Length:473 Identity:139/473 - (29%)
Similarity:230/473 - (48%) Gaps:40/473 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 GTLIMLGVMFLLFVISVTGFFVMWFTEYYNNTILENLILAENSDTANSWLNPD-PKYDTLLKAHI 145
            |||.:     ||.|.|||......|.:..:.:|.:.::|...::..:||..|. |.|   .:.:.
Human    10 GTLSL-----LLLVTSVTLLVARVFQKAVDQSIEKKIVLRNGTEAFDSWEKPPLPVY---TQFYF 66

  Fly   146 FHYPNIDDYLAGRADKIKVVDVGPLTYQEHTVKDEVSFNKN-FTVSFRDRKSYKFLPEKSSIGEH 209
            |:..|.::.|.|...:::  :|||.||:|...|..:.|..| .|:|....|:|.| ....|:|:.
Human    67 FNVTNPEEILRGETPRVE--EVGPYTYRELRNKANIQFGDNGTTISAVSNKAYVF-ERDQSVGDP 128

  Fly   210 EV--VRVPNVPLISAAGPVKRMKA-FERLAVSTWIKQFKEPLFKNLTVSEYLWGYEDSIIKLKSL 271
            ::  :|..|:|:::.   ::..:. |.|..:...:|.:::.||...||.|.||||:|.|:.|..:
Human   129 KIDLIRTLNIPVLTV---IEWSQVHFLREIIEAMLKAYQQKLFVTHTVDELLWGYKDEILSLIHV 190

  Fly   272 GRG--RRRFGLLMSRNGTSVDSVQLNTGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPSM 334
            .|.  ...|||...:|||:.......||||....|:.|.::||...||:|..|:||.|:|::...
Human   191 FRPDISPYFGLFYEKNGTNDGDYVFLTGEDSYLNFTKIVEWNGKTSLDWWITDKCNMINGTDGDS 255

  Fly   335 FSPHLLQDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSKNPANQCYCQNT 399
            |.|.:.:| ..:.||....||.|.:.|....:: ..:...||:.|.::.::.|.|..   :|...
Human   256 FHPLITKD-EVLYVFPSDFCRSVYITFSDYESV-QGLPAFRYKVPAEILANTSDNAG---FCIPE 315

  Fly   400 ELCLPSGVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQTYADIHPRFGFPISGA 464
            ..||.|||:|.:.|...|||..|||||:..|.......||:.|:...|:|:.||:|..|..:..|
Human   316 GNCLGSGVLNVSICKNGAPIIMSFPHFYQADERFVSAIEGMHPNQEDHETFVDINPLTGIILKAA 380

  Fly   465 SRVQINIMLDKTPILRNQGDRLKNTTILPLMWIEITSGDFSEEVLHTLYLSTFGLNAIQQTLKYG 529
            .|.||||.:.|.......||  ..|.:.|:|::        .|.:|....:...|.::..|    
Human   381 KRFQINIYVKKLDDFVETGD--IRTMVFPVMYL--------NESVHIDKETASRLKSMINT---- 431

  Fly   530 TLLISVTSFSLIVAGVYY 547
            ||:|:...:.::..||::
Human   432 TLIITNIPYIIMALGVFF 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_001286874.1 CD36 91..546 CDD:279474 135/461 (29%)
SCARB2NP_005497.1 CD36 28..455 CDD:307331 130/450 (29%)
Important for interaction with GBA 155..191 13/35 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.930

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