DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3829 and SCARB1

DIOPT Version :9

Sequence 1:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001354910.1 Gene:SCARB1 / 949 HGNCID:1664 Length:552 Species:Homo sapiens


Alignment Length:471 Identity:129/471 - (27%)
Similarity:232/471 - (49%) Gaps:23/471 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LGVMFLLFVISVTGFFVMWFTEYYNNTILENLILAENSDTANSWLN-PDPKYDTLLKAHIFHYPN 150
            |||..||..: :....::.........:|:|:.:..:|.:.|.|.. |.|.|   |..:.|...|
Human    14 LGVAGLLCAV-LGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIPIPFY---LSVYFFDVMN 74

  Fly   151 IDDYLAGRADKIKVVDVGPLTYQEHTVKDEVSFNKNFTVSFRDRKSYKFLPEKSSIGEHEVVRVP 215
            ..:.|.|  :|.:|.:.||..|:|...|..::||.|.||||.:.::::|.|.||...|.:.:.:|
Human    75 PSEILKG--EKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSESDYIVMP 137

  Fly   216 NVPLISAAGPVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLWGYEDSIIKL-----KSLGRGR 275
            |:.::.||..::......:|.::.......|..|.|.||.|.:|||:|.::.|     ..:...:
Human   138 NILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIMWGYKDPLVNLINKYFPGMFPFK 202

  Fly   276 RRFGLLMSRNGTSVDSVQLNTGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPSMFSPHLL 340
            .:|||....|.:......:.||..:|::..::.::||:.::|:|..|:||.|:|:...|:.|.:.
Human   203 DKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQCNMINGTSGQMWPPFMT 267

  Fly   341 QDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSKNPANQCYCQNTELCLPS 405
            .: |::..:....||.:.|.: ||..::..|...|:..|..:|::.|..|.|:.:|.    ||.|
Human   268 PE-SSLEFYSPEACRSMKLMY-KESGVFEGIPTYRFVAPKTLFANGSIYPPNEGFCP----CLES 326

  Fly   406 GVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQTYADIHPRFGFPISGASRVQIN 470
            |:.|.:.|...||:|.|.|||...||||.:...|:.|:...|..:.||||..|.|::.:.::|::
Human   327 GIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLHPNQEAHSLFLDIHPVTGIPMNCSVKLQLS 391

  Fly   471 IMLDKTPILRNQGDRLKNTTILPLMWIEITSGDFSEEVLHTLYLSTFGLNAIQQTLKYGTLLISV 535
            :.:.....:...|.  ....:|||:|. ..||....|.|||.|.....:..:....:|  :|:::
Human   392 LYMKSVAGIGQTGK--IEPVVLPLLWF-AESGAMEGETLHTFYTQLVLMPKVMHYAQY--VLLAL 451

  Fly   536 TSFSLIVAGVYYLNSR 551
            ....|:|..:..:.|:
Human   452 GCVLLLVPVICQIRSQ 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_001286874.1 CD36 91..546 CDD:279474 125/460 (27%)
SCARB1NP_001354910.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148211
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.860

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