DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3829 and scarb2

DIOPT Version :9

Sequence 1:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001016557.1 Gene:scarb2 / 549311 XenbaseID:XB-GENE-948022 Length:483 Species:Xenopus tropicalis


Alignment Length:488 Identity:136/488 - (27%)
Similarity:235/488 - (48%) Gaps:36/488 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 VMFLLFVISVTGFFVMWFTEYYNNTILENLILAENSDTANSWLNPDPKYDTLLKAHIFHYPNIDD 153
            |...|.::|:.......|.:.....:.:.::|...|:....|.||.|  ...::.:.|:..|..:
 Frog    12 VSVTLLIVSIVLLLTHTFMDIVEGQVKQAIVLKNESEVFEDWANPPP--PVYMQFYFFNVTNPLE 74

  Fly   154 YLAGRADKIKVVDVGPLTYQEHTVKDEVSFNKNFT-VSFRDRKSYKFLPEKSSIGEHEV--VRVP 215
            .|:|  :|..|.::||.||:|:..::.::|:.|.| ||....|:|.|.||| |||:.:|  :|..
 Frog    75 VLSG--EKPFVDEIGPYTYREYRPRENITFSVNGTEVSAVTPKTYVFEPEK-SIGDPKVDLIRTV 136

  Fly   216 NVPLISAAGPVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLWGYEDSIIKL-----KSLGRGR 275
            |:||::.....|.........::. :|.:||.:|...||.|.||||:|:::.:     |::.   
 Frog   137 NIPLVTILEMTKDSSLLRPFIIAA-LKTYKEGMFVTRTVDELLWGYKDAVLSILHPFKKNIS--- 197

  Fly   276 RRFGLLMSRNGTSVDSVQLNTGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPSMFSPHLL 340
            ..|||....|.|........:||.|..:|:.|.::.|...|::|..:.||.|:|::.:.|.| ||
 Frog   198 DTFGLFYKMNTTDDGEYIFLSGEKDYLEFTQIAEWKGQKALNWWTTETCNMINGTDGTSFHP-LL 261

  Fly   341 QDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSKNPANQCYCQNTELCLPS 405
            ....|:.:|...|||.:...:|....| .||.|.|:..|..||::.|.||.|:.:|.....||||
 Frog   262 NKDDTIYMFSSDLCRSIYAVYESSENI-KDISVFRFSPPASVFANVSVNPQNKGFCVPEGNCLPS 325

  Fly   406 GVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQTYADIHPRFGFPISGASRVQIN 470
            |::|.:.|...|||..|.|||:..|..:.....|::|....|.|:.|::|..|..|..|.|:|:|
 Frog   326 GLLNVSICKEGAPIVLSSPHFYQADENVINSIRGMKPVKEHHMTFLDLNPLTGTLIQAAKRIQVN 390

  Fly   471 IMLDKTPILRNQGDRLKNTTILPLMWIEITSGDFSEEVLHTLYLSTFGLNAIQQTLKYGTLLIS- 534
            :.:.|..:.....|  ..|...|:|.:       :|.||    :.......::..|..|.::.: 
 Frog   391 VYVRKINVYLITQD--IQTLFFPVMHL-------NESVL----IDDKSAGRLRSILFQGRVVANI 442

  Fly   535 ---VTSFSLIVAGVYYLNSRREQQLQESKTSAE 564
               :....:|:|.::...|..:::.::..|..|
 Frog   443 PFIIMGLGIILAFLFTTLSCLQKRSRDEGTEEE 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_001286874.1 CD36 91..546 CDD:279474 132/466 (28%)
scarb2NP_001016557.1 CD36 29..460 CDD:366481 130/454 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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