DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3829 and RGD1565355

DIOPT Version :9

Sequence 1:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001102688.1 Gene:RGD1565355 / 499985 RGDID:1565355 Length:472 Species:Rattus norvegicus


Alignment Length:465 Identity:139/465 - (29%)
Similarity:224/465 - (48%) Gaps:43/465 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VISVTGFFVMWFTE-YYNNTILENLILAENSDTANSWLNPDPKYDTLL--KAHIFHYPNIDDYLA 156
            |::|.|..:|...: ....||...::|.|.:....:|:    |..|.:  :..||...|.:: :|
  Rat    18 VLAVFGGILMPVGDLLIEKTIKREVVLEEGTIAFKNWV----KTGTTVYRQFWIFDVQNPEE-VA 77

  Fly   157 GRADKIKVVDVGPLTYQ-EHTVKDEVSFN-KNFTVSFRDRKSYKFLPEKSSIGEHEVVRVPNVPL 219
            ..:.||||...||.||: .:..|:.::.: |:.||||.......|.|..|...|::...|||  |
  Rat    78 KNSSKIKVKQRGPYTYRVRYLAKENITQDPKDSTVSFVQPNGAIFEPSLSVGTENDNFTVPN--L 140

  Fly   220 ISAAGPVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLWGYEDSIIKLKSLGRGRRRFGLLMSR 284
            ..||.|.....:|.:..::..||:.|..:|:..::.|.||||:|..:.|...... ...|:....
  Rat   141 AVAAAPHIYQNSFIQGVLNNLIKKSKSSMFQTRSLKELLWGYKDPFLSLIPYPIS-TTVGVFYPY 204

  Fly   285 NGTSVDSV-QLNTGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPSMFSPHLLQDRSTVNV 348
            |.| ||.| ::..|:|:|.|.:||..:.|...|.||: ..|:.|:|::.:.|.|.:.:.| |:..
  Rat   205 NNT-VDGVYKVFNGKDNINKVAIIDTYKGKRNLSYWK-SYCDMINGTDAASFPPFVEKSR-TLRF 266

  Fly   349 FLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSKNPANQCYCQNTEL---CLPSGVINA 410
            |...:||.:...||.||.: ..|.|.|:..|::.|:.|.:||.|.|:|....:   |...||::.
  Rat   267 FSPDICRSIYAVFESEVNL-KGIPVYRFVLPVNAFASPLQNPDNHCFCTEKVISNNCTSYGVLDI 330

  Fly   411 TKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQTYADIHPRFGFPISGASRVQINIMLD- 474
            .||....|::.|.|||....|.:.:..:|:.|:...|:||.|:.|..||.:..|.|:|:||::. 
  Rat   331 GKCKEGKPVYISLPHFLHASPDVSEPIQGLNPNEDEHRTYLDVEPITGFTLQFAKRLQVNILVKP 395

  Fly   475 --KTPILRNQGDRLKNTTILPLMWIEITS--GDFSEEVLHTLYLSTFGLNAIQQTLKYGTLLISV 535
              |...|||    ||...|:|::|:..|.  ||...|:...           |.|.|..  |:.:
  Rat   396 ARKIEALRN----LKRPYIVPILWLNETGTIGDEKVEIFRN-----------QVTGKIN--LLDL 443

  Fly   536 TSFSLIVAGV 545
            ....|:|.||
  Rat   444 VERVLLVVGV 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_001286874.1 CD36 91..546 CDD:279474 139/465 (30%)
RGD1565355NP_001102688.1 CD36 16..461 CDD:279474 139/465 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H86233
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.