DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3829 and Snmp2

DIOPT Version :9

Sequence 1:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001163372.1 Gene:Snmp2 / 38868 FlyBaseID:FBgn0035815 Length:556 Species:Drosophila melanogaster


Alignment Length:571 Identity:122/571 - (21%)
Similarity:228/571 - (39%) Gaps:140/571 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LGVMFLLFVISVTGFFVMW--FTEYYNNTILENLILAENSDTANSWLN-PDPKYDTLLKAHIFHY 148
            |||     .::|.|.:..|  |....:..:.:::::.:.|:....::| |.|   ...|.:||:.
  Fly    11 LGV-----CVAVLGGYCGWILFPNMVHKKVEQSVVIQDGSEQFKRFVNLPQP---LNFKVYIFNV 67

  Fly   149 PNIDDYLAGRADKIKVV-DVGPLTYQE-------HTVKD--EVSFNKNFTVSFRDRKSYKFLPEK 203
            .|.|....|   .|.:| ::||..|::       |..:|  ::|:.:|....|....|..:..:.
  Fly    68 TNSDRIQQG---AIPIVEEIGPYVYKQFRQKKVKHFSRDGSKISYVQNVHFDFDAVASAPYTQDD 129

  Fly   204 SSIG------------EHEVV------------RVPNVPLISAAGPVKRMKAFERLA-------- 236
            ..:.            |.|:.            |:...|.:..   :||:  .||:.        
  Fly   130 RIVALNMHMNAFLQVFEREITDIFQGFANRLNSRLNQTPGVRV---LKRL--MERIRGKRKSVLQ 189

  Fly   237 --------------VSTWIKQ-FKEP--LFKNLTVSEYLW----------GYEDSII-KLKSLGR 273
                          ::..:|. |.:|  :|.:.:|.|||:          |...:|. ::|..|.
  Fly   190 ISENDPGLALLLVHLNANLKAVFNDPRSMFVSTSVREYLFDGVRFCINPQGIAKAICNQIKESGS 254

  Fly   274 --------GRRRFGLLMSRNGTSVDSVQLNTGEDDITKFSIITQFNGMPQLDYW-----EGDE-- 323
                    |...|.....:||:..:..:::||:.|..:...|.:.:....|..|     ||:.  
  Fly   255 KTIREKSDGSLAFSFFGHKNGSGHEVYEVHTGKGDPMRVLEIQKLDDSHNLQVWLNASSEGETSV 319

  Fly   324 CNRIDGSEPSMFSPHLLQDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSK 388
            ||:|:|::.|.:.| ..|...::.:|...:||.|.|.::.::. |..|...||....:..:....
  Fly   320 CNQINGTDASAYPP-FRQRGDSMYIFSADICRSVQLFYQTDIQ-YQGIPGYRYSIGENFINDIGP 382

  Fly   389 NPANQCYC--------QNTELCLPSGVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAA 445
            ...|:|:|        :....||.:|.::.|.|. |||:..:.||.........:...|::|||.
  Fly   383 EHDNECFCVDKLANVIKRKNGCLYAGALDLTTCL-DAPVILTLPHMLGASNEYRKMIRGLKPDAK 446

  Fly   446 VHQTYADIHPRFGFPISGASRVQINIML---DKTPILRNQGDRLKNTTILPLMWIE---ITSGD- 503
            .|||:.|:....|.|:.|..|||.|:.|   ::..|..|     ..|.::|.:|:|   ..:|: 
  Fly   447 KHQTFVDVQSLTGTPLQGGKRVQFNMFLKSINRIGITEN-----LPTVLMPAIWVEEGIQLNGEM 506

  Fly   504 ---FSEEVLHTLYLSTFGLNAIQQTLKYGTLLISVTSFSLIVAGVYYLNSR 551
               |.:::::||..    ||.:......|.:.::|...      :||:..|
  Fly   507 VAFFKKKLINTLKT----LNIVHWATLCGGIGVAVACL------IYYIYQR 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_001286874.1 CD36 91..546 CDD:279474 116/560 (21%)
Snmp2NP_001163372.1 CD36 10..543 CDD:395898 119/565 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450749
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
65.850

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