DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3829 and santa-maria

DIOPT Version :10

Sequence 1:NP_611992.3 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_609121.2 Gene:santa-maria / 34024 FlyBaseID:FBgn0025697 Length:563 Species:Drosophila melanogaster


Alignment Length:506 Identity:127/506 - (25%)
Similarity:233/506 - (46%) Gaps:56/506 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VISVTGFFV--------MWFTEYYNNTILENLILAENSDTANSWLNPDPKYDTLLKAHIFHYPNI 151
            :|.:.||.:        |::.:.::..:.:.:.||.::....:|  ..|..|..|..:::::.|.
  Fly    18 IIGIFGFCLGLFGILCGMFWVDLFDWIMHKEMALAPDTRVYENW--KSPPIDLSLDIYLYNWTNP 80

  Fly   152 DDYLAGRADKIKVVDVGPLTYQEHTVKDEVSFN-KNFTVSFRDRKSYKFLPEKSSIGEHEVVRVP 215
            :|: ...:.|..:..|||..:.|...|.::.:: :|.:|::|.|..:.|....|:....:.:...
  Fly    81 EDF-GNLSTKPILEQVGPYRFIERPDKVDIHWHPENASVTYRRRSLFYFDAAGSNGSLDDEITTL 144

  Fly   216 NVPLISAAGPVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLW-GYEDSII----KLKSLGRGR 275
            |...:|||...|.....:|..|...:|.:...:....::.|.|: ||.|::|    .:...|...
  Fly   145 NAVALSAAATAKYWPPVKRSLVDVGLKMYGAEMSVQKSIDELLFTGYNDAMIDVAMAMPIFGDEV 209

  Fly   276 R----RFGLLMSRNGTSVDSVQLN--TGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPSM 334
            :    :||...:|||::..:...|  ||.|.:.|...:..:|......::: ..|...:|| ...
  Fly   210 KVPFDKFGWFYTRNGSADLTGVFNVFTGADQLAKLGQMHSWNYQENTGFFD-SYCGMTNGS-AGE 272

  Fly   335 FSPHLLQDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLR-YR---TPMDVFSHPSKNPANQCY 395
            |.|..|:...:|.:|...:||.:||.:.:.|    ||:.|. |:   .|..| .:.::.|.|.|:
  Fly   273 FQPQHLKPGDSVGLFTPDMCRTIPLDYVETV----DIEGLEGYKFSGGPRSV-DNGTQYPENLCF 332

  Fly   396 CQNTELCLPSGVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQTYADIHPRFGFP 460
            |...  |:||||:|.:.|...:|:|.|:||||..||......||:.|:...|:.|..:.|..|.|
  Fly   333 CGGQ--CVPSGVMNISSCRFGSPVFMSYPHFFNADPYYPDQVEGLSPNQKDHEFYMVVQPSTGIP 395

  Fly   461 ISGASRVQINIMLDKTPILRNQGDRLKN---TTILPLMWIE----ITSGDFSEE--VLHTLYLST 516
            :..|:|.|:|::::  ||   ||..|..   ....||:|.|    ||. |.:::  ||..:.||.
  Fly   396 LEVAARFQVNMLVE--PI---QGISLYTGIPRIFFPLVWFEQKVRITP-DMADQLKVLPIVMLSG 454

  Fly   517 FGLNAIQQTLKYGTLLISVTSFSLIVAGVYYLNSRREQQLQESKTSAELEA 567
            .....|  .|..|..|:..|...:::|.   ..:||.....::||:.:.::
  Fly   455 HIFAGI--CLIVGITLLCWTPVQILLAS---CRNRRYDLRTKTKTNGQYKS 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_611992.3 CD36 87..547 CDD:460076 123/484 (25%)
santa-mariaNP_609121.2 CD36 21..476 CDD:460076 121/474 (26%)

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