DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3829 and scarb2c

DIOPT Version :10

Sequence 1:NP_611992.3 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001352071.1 Gene:scarb2c / 337532 ZFINID:ZDB-GENE-030131-5789 Length:478 Species:Danio rerio


Alignment Length:459 Identity:147/459 - (32%)
Similarity:232/459 - (50%) Gaps:20/459 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 NNTILENLILAENSDTANSWLNPDPKYDTLLKAHIFHYPNIDDYLAGRADKIKVVDVGPLTYQEH 175
            |||:.:.::|...::..:.|.||.|  ...::.:.|:..|..:.::|  ||..||.:||.||:|:
Zfish    36 NNTVKQQIVLENGTEAFSVWQNPPP--PVYMQFYFFNLTNPAEVMSG--DKPSVVQIGPYTYREY 96

  Fly   176 TVKDEVSFNKNFT-VSFRDRKSYKFLPEKSSIGEHEVVRVPNVPLISAAGPVKRMKAFERLAVST 239
            ...:||.|..|.| |:..:.|:|.|.|..|...:.::||..|:|.::.....|. ....|| :|.
Zfish    97 RPMEEVKFMDNGTRVAAINPKTYVFEPNMSRGSQDDLVRTVNIPAVTVMEKYKD-SILARL-ISD 159

  Fly   240 WIKQFKEPLFKNLTVSEYLWGYEDSIIKLKSLGRGRRRFGLLMSRNGTSVDSVQLNTGEDDITKF 304
            .:|.....:|:...|.:.||||||.::|...:......|||...:|||..||..|.||:.|...|
Zfish   160 LMKAKGVGVFETFRVGDLLWGYEDPLLKELHMLVPDDHFGLFYKKNGTEYDSYVLLTGKPDYQDF 224

  Fly   305 SIITQFNGMPQLDYWEGDECNRIDGSEPSMFSPHLLQDRSTVNVFLQVLCRKVPLHFEKEVTIYN 369
            :.|.::||...|::|..:|||.|:|::.:.|.| ::.....:.:|...|||.:.:.:|.:|:: .
Zfish   225 ASIDEWNGQRSLNWWSSEECNMINGTDGASFHP-IITKADRLYIFSSDLCRSLYVQYECDVSV-Q 287

  Fly   370 DIDVLRYRTPMDVFSHPSKNPANQCYCQNTELCLPSGVINATKCYGDAPIFPSFPHFFTGDPVLY 434
            .:...|:..|.||||.|..||.|..:|.....||.||::||:.|...|||..|.|||:..|....
Zfish   288 GVPGFRFVPPADVFSSPDINPDNAGFCVPPGHCLGSGLLNASVCKQGAPIIMSSPHFYQADQKFV 352

  Fly   435 QDFEGIEPDAAVHQTYADIHPRFGFPISGASRVQINIMLDKTPILRNQGDRLKNTTILPLMWIEI 499
            .|..|::|....|||:|||:|..|..:.||.|||:|:.|.:.......|.  ..|.:.|:|:|. 
Zfish   353 DDIWGMKPIKEEHQTFADINPLTGIVLQGAKRVQVNVYLQQHSSFSQTGK--IQTLVFPVMYIN- 414

  Fly   500 TSGDFSEEVLHTLYLSTFGLNAIQQTLKYGTLLISVTSFSLIVAGVYYLNSRREQQLQESKTSAE 564
            .|....||....|:......|.:   :....::|||.    |:.|:.::.....||:..| |.||
Zfish   415 ESAFIDEESAKKLHAVVLNANVV---INIPFIVISVG----ILLGIIFIVLMCRQQMPPS-TLAE 471

  Fly   565 LEAL 568
            .|.|
Zfish   472 REPL 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_611992.3 CD36 87..547 CDD:460076 139/436 (32%)
scarb2cNP_001352071.1 CD36 13..459 CDD:460076 139/440 (32%)

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