DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3829 and Scarb1

DIOPT Version :10

Sequence 1:NP_611992.3 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001192012.1 Gene:Scarb1 / 20778 MGIID:893578 Length:520 Species:Mus musculus


Alignment Length:493 Identity:137/493 - (27%)
Similarity:238/493 - (48%) Gaps:45/493 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LGVMFLLFVISVTGFFVMWFTEYYNNTILENLILAENSDTANSWLN-PDPKYDTLLKAHIFHYPN 150
            |||:.:|.|.|:           ....:|:|:.:..:|.:...|.. |.|.|   |..:.|...|
Mouse    24 LGVVMILMVPSL-----------IKQQVLKNVRIDPSSLSFGMWKEIPVPFY---LSVYFFEVVN 74

  Fly   151 IDDYLAGRADKIKVVDVGPLTYQEHTVKDEVSFNKNFTVSFRDRKSYKFLPEKSSIGEHEVVRVP 215
            .::.|.|:  |..|.:.||..|:|...|..::||.|.||||.:.:|..|.|:||...|.:.:.:|
Mouse    75 PNEVLNGQ--KPVVRERGPYVYREFRQKVNITFNDNDTVSFVENRSLHFQPDKSHGSESDYIVLP 137

  Fly   216 NV-----PLISAAGPVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLWGYEDSIIK-----LKS 270
            |:     .::..:.||. :|....||:.|    ..:..|.|.||.|.||||:|..:.     |..
Mouse   138 NILVLGGSILMESKPVS-LKLMMTLALVT----MGQRAFMNRTVGEILWGYDDPFVHFLNTYLPD 197

  Fly   271 LGRGRRRFGLLMSRNGTSVDSVQLNTGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPSMF 335
            :...:.:|||.:..|.::.....:.||..:.::..::.::||:.::|||..::||.|:|:...|:
Mouse   198 MLPIKGKFGLFVGMNNSNSGVFTVFTGVQNFSRIHLVDKWNGLSKIDYWHSEQCNMINGTSGQMW 262

  Fly   336 SPHLLQDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSKNPANQCYCQNTE 400
            :|.:..: |::..|....||.:.|.: .|..::..|...|:..|..:|::.|..|.|:.:|.   
Mouse   263 APFMTPE-SSLEFFSPEACRSMKLTY-NESRVFEGIPTYRFTAPDTLFANGSVYPPNEGFCP--- 322

  Fly   401 LCLPSGVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQTYADIHPRFGFPISGAS 465
             |..||:.|.:.|...||:|.|.|||:..||||.:...|:.|:...|..:.||||..|.|::.:.
Mouse   323 -CRESGIQNVSTCRFGAPLFLSHPHFYNADPVLSEAVLGLNPNPKEHSLFLDIHPVTGIPMNCSV 386

  Fly   466 RVQINIMLDKTPILRNQGDRLKNTTILPLMWIEITSGDFSEEVLHTLYLSTFGLNAIQQTLKYGT 530
            ::|:::.:.....:...|.  ....:|||:|.| .||....:.|.|.|..   |..:.|.|.|..
Mouse   387 KMQLSLYIKSVKGIGQTGK--IEPVVLPLLWFE-QSGAMGGKPLSTFYTQ---LVLMPQVLHYAQ 445

  Fly   531 -LLISVTSFSLIVAGVYYLNSRREQQLQESKTSAELEA 567
             :|:.:....|:|..:..|.|:..::...:..||.:.|
Mouse   446 YVLLGLGGLLLLVPIICQLRSQVSRRGGHASDSARVSA 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_611992.3 CD36 87..547 CDD:460076 132/471 (28%)
Scarb1NP_001192012.1 CD36 26..447 CDD:460076 127/453 (28%)

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