DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3829 and scav-6

DIOPT Version :9

Sequence 1:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_492081.1 Gene:scav-6 / 184107 WormBaseID:WBGene00008542 Length:590 Species:Caenorhabditis elegans


Alignment Length:573 Identity:123/573 - (21%)
Similarity:234/573 - (40%) Gaps:124/573 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 LIMLGVMFLLFVISVTGFFVMW--FTEYYNNTILENLILAENSDTA---NSWLNPDPKYDTLLKA 143
            |:::.::|::|.|      |.|  |:..|:..:::||.|.|||||:   :::....|:.|.::|.
 Worm    14 LVVIAIVFIVFGI------VTWAAFSSIYSTLVIKNLQLTENSDTSLGYSAFQYTSPQVDNIMKF 72

  Fly   144 HIFHYPNIDD---YLAGRADKIKVVDVGPLTYQEHTVKDEVSFNKNFTVSF-RDRKSYKFLPEKS 204
            :.|:..|.|:   |.|..    .:|::||.:..|...|..:.|:.:.:..| ::.|.|....:.|
 Worm    73 YFFNVTNPDEVKYYSAAP----NLVEIGPFSVMESEQKKYLEFSDDKSQMFYQNYKKYILSKDYS 133

  Fly   205 SIG---EHEVVRVPNVPLISAAG----PVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLW-GY 261
            ...   :..:| .||.|.:.|..    |..::....|..::..:....|..|.:..|.|.|: ||
 Worm   134 CEDCDWDRNIV-FPNPPGLGAVASMLDPQFQITKTGRTIIAVALTILGEYPFVSHKVREVLFDGY 197

  Fly   262 EDSIIK---------LKSLGRG------------RRRFGLLMSRNGTSVDSVQLNTGEDDITKFS 305
            ||:::.         |..:.:|            ..:||.....|.:..:...:.||:.||.:..
 Worm   198 EDALLSAAHSGFVTVLSGIFKGDGGSIVPIPIPAMPKFGYFQGYNNSRDEEYWIETGKKDINQIG 262

  Fly   306 IITQFNGMPQL--DYWEGDECNRIDGSEPSMFSPHLLQDRSTVNVFLQVLCRKVPLHFEKEVTIY 368
            .:.::.|:.:|  ::|...:...|.||:...|:...|.:.||.::|...:||.....|.:..|| 
 Worm   263 NVQRWAGITELPGEWWTTPKARSIRGSDSGSFTQMHLDESSTADMFFSFMCRSFTKTFYQRETI- 326

  Fly   369 NDIDVLRYRTPMDVFSHPSKN----------------------PANQCY------CQNT----EL 401
            ..|..:.|....|.:...|.|                      |..||:      |..:    ..
 Worm   327 ESIPTIGYHIGYDEWDTTSDNNVGFRYRNIEKRNYFPDWPKCPPKGQCHQSGSIDCSKSINFCHA 391

  Fly   402 CLPSGVINAT----------KCYGD-------APIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQT 449
            |....:.|.|          .||..       |.:: |.|||......:.....|:.|:.::|:.
 Worm   392 CCDGSLYNGTYLLPPGMFPLVCYPGRLQPTPFAVVY-SPPHFLFSPDEVRTTVVGMAPNKSLHEP 455

  Fly   450 YADIH-PRFGFPISGASRVQINIMLDKTPILRN----QGDRLKNTTILPLMWIEITSGDFSEEVL 509
            ....| |..|..:...:|:|:|:     |::|:    ....:.| .::||.| :.||..:.:.:.
 Worm   456 MIYYHEPYSGTTLKVVNRLQVNM-----PVIRSHDVPSSQNMPN-VMIPLFW-QDTSPKYHQFIF 513

  Fly   510 HTLYLSTFGLNAIQQTLKYGTLLISVTSFSLIVAGVYYLNSRREQQLQESKTS 562
            :.::|....:..:.:.|::..|.|.:    |:||.:.:|      ||::.|.|
 Worm   514 NEVWLGFVLVPRLMRVLQFVALGIGL----LLVAIIVFL------QLRKGKPS 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_001286874.1 CD36 91..546 CDD:279474 117/548 (21%)
scav-6NP_492081.1 CD36 18..547 CDD:279474 117/552 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.930

Return to query results.
Submit another query.