DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3829 and scav-1

DIOPT Version :9

Sequence 1:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_508919.2 Gene:scav-1 / 180812 WormBaseID:WBGene00015389 Length:563 Species:Caenorhabditis elegans


Alignment Length:565 Identity:123/565 - (21%)
Similarity:221/565 - (39%) Gaps:130/565 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 IMLGVMFLL-FVISVTGFFVMW--FTEYYNNTILENLILAENSD-TAN----SWLNPDPKYDTLL 141
            :..|::||: ..:.|.|..::.  |....||.|.::.:|..|:| |.|    ||:|  .||.:.:
 Worm    10 VSAGIIFLIGAALLVAGLVIVLNVFPNIVNNQINDSKVLGLNADGTLNSFTDSWVN--SKYISTM 72

  Fly   142 KAHIFHYPNIDDYLAGRADKIKVVDVGPLTYQEHTVKDEVSFNKNFT-VSFRDRKSYKFLPEKSS 205
            :..::.|.|... :..||....|.:.||..:.|....|:::|::|.. :.||..:::.|.|.||.
 Worm    73 QYWVYDYTNTIG-IMNRAIYPDVREKGPYAFDEILTMDKLNFSENGEFMEFRQIQTFVFNPNKSC 136

  Fly   206 IG---EHEVVRVPNV-------------------PLI------------SAAGPVKRMKAFERLA 236
            .|   ..:.|.:|::                   ||.            :|......:.|.....
 Worm   137 AGCDPYKDKVLIPDMGFQVGIDQIDTVIEGILKNPLAATICHAIMKGKPNANQTCSNLGALIEGE 201

  Fly   237 VSTWIKQFKEPLFKNLTVSEYLW-GYEDSIIKL---KSLGRGRRRFGL-----------LMSRNG 286
            :.|.|..|....|..:||.:.|: ||:...::.   ::||.....||.           |...||
 Worm   202 LGTLISLFNVSPFTTVTVDQLLFSGYKTPFVEKFLDEALGMLHFLFGTAPKPLDDPPIQLNPLNG 266

  Fly   287 TSVDSVQLNTGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPSMFSPH------------- 338
            ||.....:.||:.|..|...:|:|..:.....:     |.|..:.|.|:.|:             
 Worm   267 TSDIINTVLTGKTDPLKAGYMTEFRSISNNSLF-----NSIGNTLPPMWWPYANKTYCKDPNSAL 326

  Fly   339 ------------LLQDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSH------ 385
                        .::....:..|:..:||.:...|::|||: ......|:..|...|.:      
 Worm   327 VLTGTNGDYFKNFVKKTDILPAFVSDVCRTIHFVFDREVTV-KGFKGYRFVMPPTQFDYSLDENC 390

  Fly   386 ----PSKNPANQCYCQNTELCLPSGVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAV 446
                |.|..:.:...|:.  |||||:::.::|.| .||..|.|||:....|:.:.....:|....
 Worm   391 GYCIPLKYGSYEYPAQSA--CLPSGLLDISQCTG-GPIIMSKPHFYQASKVVSKFVPRFKPTYDN 452

  Fly   447 HQTYADIHPRFGFPISGASRVQINIMLDKTPILRNQGDRLKNTTIL-----PLMWI--------- 497
            .:|..||.|..|..:....|:|||:::       ||...:::.:::     ||.|:         
 Worm   453 DETMLDIEPNTGTVLQAQKRLQINMLV-------NQFKHIRSYSVMRPGAYPLAWVNESFYMDQN 510

  Fly   498 ---EITSGDFSE-EVLHTLYLSTFGLNAIQQTLKYGTLLISVTSF 538
               ::.|..|:. ..::|:.....||.|....|....:::|...|
 Worm   511 TIDQLNSQLFTPVSTVNTICWIAVGLGAGLIALSIVMVIVSFCCF 555

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_001286874.1 CD36 91..546 CDD:279474 122/559 (22%)
scav-1NP_508919.2 CD36 19..546 CDD:279474 118/545 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 1.030639 Normalized mean entropy S6187
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.880

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