DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG3829 and Cd36

DIOPT Version :9

Sequence 1:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:NP_001153027.1 Gene:Cd36 / 12491 MGIID:107899 Length:472 Species:Mus musculus


Alignment Length:460 Identity:133/460 - (28%)
Similarity:221/460 - (48%) Gaps:30/460 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 VISVTGFFVMWFTE-YYNNTILENLILAENSDTANSWLNPDPKYDTLL--KAHIFHYPNIDDYLA 156
            |::|.|..:|...: ....||...::|.|.:....:|:    |..|.:  :..||...|.|| :|
Mouse    18 VLAVFGGILMPVGDMLIEKTIKREVVLEEGTTAFKNWV----KTGTTVYRQFWIFDVQNPDD-VA 77

  Fly   157 GRADKIKVVDVGPLTYQ-EHTVKDEVSFN-KNFTVSFRDRKSYKFLPEKSSIGEHEVVRVPNVPL 219
            ..:.||||...||.||: .:..|:.::.: ::.||||.......|.|..|...|.:...|.|  |
Mouse    78 KNSSKIKVKQRGPYTYRVRYLAKENITQDPEDHTVSFVQPNGAIFEPSLSVGTEDDNFTVLN--L 140

  Fly   220 ISAAGPVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLWGYEDSIIKLKSLGRGRRRFGLLMSR 284
            ..||.|.....:|.::.:::.||:.|..:|:..::.|.||||:|..:.|...... ...|:....
Mouse   141 AVAAAPHIYQNSFVQVVLNSLIKKSKSSMFQTRSLKELLWGYKDPFLSLVPYPIS-TTVGVFYPY 204

  Fly   285 NGTSVDSV-QLNTGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPSMFSPHLLQDRSTVNV 348
            |.| ||.| ::..|:|:|:|.:||..:.|...|.||. ..|:.|:|::.:.|.|.:.:.| |:..
Mouse   205 NDT-VDGVYKVFNGKDNISKVAIIESYKGKRNLSYWP-SYCDMINGTDAASFPPFVEKSR-TLRF 266

  Fly   349 FLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSKNPANQCYCQNTEL---CLPSGVINA 410
            |...:||.:...|..|:.: ..|.|.|:..|.:.|:.|.:||.|.|:|....:   |...||::.
Mouse   267 FSSDICRSIYAVFGSEIDL-KGIPVYRFVLPANAFASPLQNPDNHCFCTEKVISNNCTSYGVLDI 330

  Fly   411 TKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQTYADIHPRFGFPISGASRVQINIMLD- 474
            .||....|::.|.|||....|.:.:..||:.|:...|:||.|:.|..||.:..|.|:|:||::. 
Mouse   331 GKCKEGKPVYISLPHFLHASPDVSEPIEGLHPNEDEHRTYLDVEPITGFTLQFAKRLQVNILVKP 395

  Fly   475 --KTPILRNQGDRLKNTTILPLMWIEITS--GDFSEEVLHTLYLSTFGLNAIQQTLKYGTLLISV 535
              |...|:|    ||...|:|::|:..|.  ||...|:..|.......|..:.:....|..::..
Mouse   396 ARKIEALKN----LKRPYIVPILWLNETGTIGDEKAEMFKTQVTGKIKLLGMVEMALLGIGVVMF 456

  Fly   536 TSFSL 540
            .:|.:
Mouse   457 VAFMI 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_001286874.1 CD36 91..546 CDD:279474 133/460 (29%)
Cd36NP_001153027.1 CD36 16..463 CDD:366481 133/460 (29%)
Required for interaction with thrombospondins, THBS1 and THBS2. /evidence=ECO:0000269|PubMed:15748999 93..120 6/26 (23%)
Interaction with PTK2, PXN and LYN. /evidence=ECO:0000250|UniProtKB:P16671 460..472 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 1.030639 Normalized mean entropy S6187
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.760

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