DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3829 and scarb1

DIOPT Version :10

Sequence 1:NP_611992.3 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster
Sequence 2:XP_002935333.1 Gene:scarb1 / 100490714 XenbaseID:XB-GENE-494666 Length:505 Species:Xenopus tropicalis


Alignment Length:509 Identity:146/509 - (28%)
Similarity:253/509 - (49%) Gaps:44/509 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 IMLGVMFLLFVISVTGFFVMWFTEYYNNTILENLILAENSDTA-NSWLN-PDPKYDTLLKAHIFH 147
            |:.||:.:| ::.|....|.......:..:.:|:.:..:|..| ..|.: |.|.|   :..:||.
 Frog    10 IVFGVLGVL-LVGVGTLLVFLVPVIMDEQVEKNVRIDPSSGFAYEMWRDLPVPFY---MSIYIFE 70

  Fly   148 YPNIDDYLAGRADKIKVVDVGPLTYQEHTVKDEVSFNKNFTVSFRDRKSYKFLPEKSSIGEHEVV 212
            ..|..:.|.|  :|.::.:.||..|:|:..|..::||:|.||||.:.:::.|.||||:..|.:.|
 Frog    71 VVNHKEVLLG--EKPQLQERGPYVYREYKKKQNITFNENGTVSFVEFRTFHFDPEKSNGKEEDHV 133

  Fly   213 RVPNVPLISAAGPVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLWGYEDSII---------KL 268
            .|||:.::.::..::.:....:..:|.....|.|..|.|.||.:.||||||..:         ||
 Frog   134 IVPNILVLGSSVMLQDLGIAIKWIISGAFSAFNEEAFINKTVKDILWGYEDPFLDFLNTFLPGKL 198

  Fly   269 KSLGRGRRRFGLLMSRNGTSVDSVQLNTGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPS 333
            ...|    :||.....|.::.....:|||.:||::..::..:||:.::|:|..::.|.|:|:...
 Frog   199 PFKG----KFGFFSDFNNSNTGVFTVNTGMEDISRVQMVDNWNGLKKVDFWNSEQTNMINGTAGQ 259

  Fly   334 MFSPHLLQDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSKNPANQCYCQN 398
            |:.| ..:....:..:....||.:.|.:|||.. :..|...||..|..:|::.|..|.|:.:|. 
 Frog   260 MWPP-FRKPSEPLEFYSPDACRSMKLVYEKEEK-FRGIPTFRYTAPNYLFANGSDYPPNEGFCP- 321

  Fly   399 TELCLPSGVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPDAAVHQTYADIHPRFGFPISG 463
               |:.|||.|.:.|..:||:|.|||||:..||...:..||:.|...:|..:.|:||..|.|::.
 Frog   322 ---CVASGVQNVSACRFNAPLFLSFPHFYNADPGFLESVEGLHPTEELHSLFLDMHPLTGIPMNC 383

  Fly   464 ASRVQINIMLDKTPILRNQGDRLKNTTILPLMWIEITSGDFSEEVLHTLYLSTFGLNAIQQTLKY 528
            :.::|:| ||.|:.....|..::| ..|||::|. ..||.....|.:|.|.....:..:.:.|:|
 Frog   384 SIKMQLN-MLTKSVSGIMQTGQIK-PVILPVLWF-AESGHLDGPVYNTYYNILILMPIVLEYLQY 445

  Fly   529 GTLLISVTSFSLIVAGV-----------YYLNSRREQQLQESKTSAE-LEALNG 570
              :||.:....:.||.|           ::.:::...:.||.||..| |.|.||
 Frog   446 --VLIGIGLCFITVALVLPFVKQGKCFLFWNSNKNVDESQEFKTQKEKLTAPNG 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3829NP_611992.3 CD36 87..547 CDD:460076 136/481 (28%)
scarb1XP_002935333.1 CD36 31..461 CDD:460076 130/449 (29%)

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