DRSC/TRiP Functional Genomics Resources

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Protein Alignment emp and SCARB1

DIOPT Version :9

Sequence 1:NP_726504.2 Gene:emp / 37999 FlyBaseID:FBgn0010435 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_001354910.1 Gene:SCARB1 / 949 HGNCID:1664 Length:552 Species:Homo sapiens


Alignment Length:485 Identity:157/485 - (32%)
Similarity:243/485 - (50%) Gaps:44/485 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KWWITIVVAAALIIGGIVVACEFTVLIDAV-------VDRMVALRPGAKTFGWWAKPPVEPRISL 107
            :|     .|.||.:.|::.|....|:|..|       |.:.|.:.|.:.:|..|.:.|:...:|:
Human     8 RW-----AAGALGVAGLLCAVLGAVMIVMVPSLIKQQVLKNVRIDPSSLSFNMWKEIPIPFYLSV 67

  Fly   108 YIYNVTNADDFLSNGSKAIVDEVGPYVYSETWEKVNIVENDNGTLSYNLRKIYSFREDLSVGPED 172
            |.::|.|..:.| .|.|..|.|.|||||.|...|.||..|:|.|:|:...:.:.|:...|.|.|.
Human    68 YFFDVMNPSEIL-KGEKPQVRERGPYVYREFRHKSNITFNNNDTVSFLEYRTFQFQPSKSHGSES 131

  Fly   173 DVVIVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFVQVSVGQLLWGYEDPLLKLAKDVVP 237
            |.:::|||.:|.|....::....|:|.|......|..:.|:..:||:::|||:|||:.|.....|
Human   132 DYIVMPNILVLGAAVMMENKPMTLKLIMTLAFTTLGERAFMNRTVGEIMWGYKDPLVNLINKYFP 196

  Fly   238 KEQKLPY-EEFGLLYGKNGTSSDRVTVNTGVDDIRRYGIIDNFNGRTHLPHWTTDACNTLAGTDG 301
              ...|: ::|||....|.:.|...||.|||.:|.|..::|.:||.:.:..|.:|.||.:.||.|
Human   197 --GMFPFKDKFGLFAELNNSDSGLFTVFTGVQNISRIHLVDKWNGLSKVDFWHSDQCNMINGTSG 259

  Fly   302 SIFPPHIDHDRILHVYDKDLCRLLPLVFEKEVMTSNEVPGYRFTPPEWVFADVDSHPDNMCFCPA 366
            .::||.:..:..|..|..:.||.:.|:: ||......:|.|||..|:.:||:...:|.|..||| 
Human   260 QMWPPFMTPESSLEFYSPEACRSMKLMY-KESGVFEGIPTYRFVAPKTLFANGSIYPPNEGFCP- 322

  Fly   367 GKPSCSPNGLFNVSLCQYDSPIMLSFPHFYLADESLRTQVEGISPPMKEKHQFFFDVQPKMGTTL 431
                |..:|:.|||.|::.:|:.||.|||..||..|...|.|:. |.:|.|..|.|:.|..|..:
Human   323 ----CLESGIQNVSTCRFSAPLFLSHPHFLNADPVLAEAVTGLH-PNQEAHSLFLDIHPVTGIPM 382

  Fly   432 RVRARIQINLAVSQVFDIKQVANFPDIIFPILWF-EEGI---DNLPDEVTDL------MRFAEQV 486
            ....::|::|.:..|..|.|......::.|:||| |.|.   :.|....|.|      |.:|:.|
Human   383 NCSVKLQLSLYMKSVAGIGQTGKIEPVVLPLLWFAESGAMEGETLHTFYTQLVLMPKVMHYAQYV 447

  Fly   487 PPKIRVALIVGLCALGVILLLLSTFCLIRN 516
                       |.|||.:|||:...|.||:
Human   448 -----------LLALGCVLLLVPVICQIRS 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
empNP_726504.2 CD36 58..511 CDD:279474 153/470 (33%)
SCARB1NP_001354910.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148210
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 250 1.000 Inparanoid score I3236
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 1 1.000 - - mtm8581
orthoMCL 1 0.900 - - OOG6_103616
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1211.810

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