DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment emp and cd36

DIOPT Version :9

Sequence 1:NP_726504.2 Gene:emp / 37999 FlyBaseID:FBgn0010435 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_001002363.1 Gene:cd36 / 436636 ZFINID:ZDB-GENE-040718-55 Length:465 Species:Danio rerio


Alignment Length:475 Identity:150/475 - (31%)
Similarity:225/475 - (47%) Gaps:51/475 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 ITIVVAAALI--IGGIVVACEFTVLIDAVVDRMVALRPGAKTFGWWAKPPVEPRISLYIYNVTNA 115
            ||..|..|||  :|||::... .::|...|.:...|..|...|..|....:......:|:||.|.
Zfish    11 ITGAVLGALIALLGGILIPVG-DMIIKNTVHKETVLENGTLAFDTWTSVDIAMYRQFWIFNVENP 74

  Fly   116 DDFLSNGSKAIVDEVGPYVYSETW-EKVNIVENDNGTLSYNLRKIYSFREDLSVGPEDDVVIVPN 179
            |..||.|||.::.:.|||.|...: .|.||..|||.|:|:.|....:|...:|||.|:||.    
Zfish    75 DKVLSEGSKPVLVQKGPYTYRVRYIPKTNITFNDNNTVSFVLPAGATFEPSMSVGSEEDVF---- 135

  Fly   180 IPMLSATSQSKHAARFLRLAMASIMDILKIKP-----FVQVSVGQLLWGYEDPLLKLAKDVVPKE 239
                  ||.:...|...||....:.|.| |:.     |...:|.:|||||:||:|.         
Zfish   136 ------TSLNLAVAGVYRLIGPKLADWL-IRSSGSSLFQNRTVKELLWGYKDPMLN--------- 184

  Fly   240 QKLPYEEFGLLYGKNGTSSDRVTVNTGVDDIRRYGIIDNFNGRTHLPHWTTDACNTLAGTDGSIF 304
                 ...|..|..|||.....||.||.|||.:..||:.:.|.|.:.:|....|:.:.|:|||.|
Zfish   185 -----SLVGAFYPYNGTVDGPYTVFTGKDDINKVAIIERWQGETSVNYWNDSYCDKINGSDGSSF 244

  Fly   305 PPHIDHDRILHVYDKDLCRLLPLVFEKEVMTSNEVPGYRFTPPEWVFADVDSHPDNMCFCPAGK- 368
            .|.:|....|:.:..|:||.:...:|..|.... :..||:..|....|...|:|||||:|...: 
Zfish   245 HPFLDKKEPLYFFSPDICRSISAEYEATVNLKG-IDVYRYLLPVDALASPVSNPDNMCYCTDHEI 308

  Fly   369 -PSCSPNGLFNVSLCQYDSPIMLSFPHFYLADESLRTQVEGISPPMKEKHQFFFDVQPKMGTTLR 432
             .:|:..||.:::.|: .:|:.:|.|||..|...|:..|.|::|.:.| |..|.||:|..|.|||
Zfish   309 TRNCTLAGLLDITSCK-GTPVFISLPHFLYASIELQQGVVGMNPNLDE-HSIFLDVEPITGFTLR 371

  Fly   433 VRARIQINLAVSQVFDIKQVANFPD-IIFPILWFEEG--IDN-----LPDEVTDLMRFAEQVPPK 489
            ...|:|:|:......||..:....: .|.||||..|.  :|:     ..:|:...|...|.:...
Zfish   372 FSKRLQVNMMYGPSDDIALLNKIKEHTIIPILWLNETAVLDDETAKMFKNELISRMDMLEGLQIG 436

  Fly   490 IRV---ALIVGLCALGVILL 506
            :.|   |:.:| |.:|:|::
Zfish   437 LLVTGSAIFLG-CMIGLIVV 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
empNP_726504.2 CD36 58..511 CDD:279474 147/470 (31%)
cd36NP_001002363.1 CD36 17..450 CDD:279474 145/462 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.820

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