DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment emp and CG10345

DIOPT Version :9

Sequence 1:NP_726504.2 Gene:emp / 37999 FlyBaseID:FBgn0010435 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_650563.2 Gene:CG10345 / 42017 FlyBaseID:FBgn0027562 Length:552 Species:Drosophila melanogaster


Alignment Length:470 Identity:135/470 - (28%)
Similarity:241/470 - (51%) Gaps:35/470 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LIIGGIVVACEFTVLIDAVVDRMVALRPGAKTFGWWAKPPVEPRISLYIYNVTNADDFLS-NGSK 124
            |..|.:|:..:   .:.:::|..::|:||......|..||::..|::|::|.||.|:|.| ..||
  Fly    25 LFFGSLVIISD---PLQSILDTQLSLKPGTLLHRLWLLPPLDVYINVYMFNYTNVDEFTSGRASK 86

  Fly   125 AIVDEVGPYVYSETWEKVNIVEND-NGTLSYNLRKIYSFREDLSVG-PEDDVVIVPNIPMLSATS 187
            ..:.|||||||.|.....|:..|: |.|::|:.::.|.|..:.||| |:.|.:..||||::..|:
  Fly    87 LQLQEVGPYVYKEVLSNHNVTYNESNNTITYSPKREYVFAPERSVGDPKIDRIRAPNIPLMGVTT 151

  Fly   188 QSKHAARFLRLAMASIMDILKIKPFVQVSVGQLLWGYEDPLLKLAKDVVPKEQKLPYEEFGLL-- 250
            .:...:.|..|.:::|...|..:|.:::||...:|||||.|::||...||  ..:.:..||::  
  Fly   152 LASSLSMFAALGLSAITRQLNSQPMLEMSVHDYMWGYEDHLVELASRFVP--NWIDFSSFGIMEK 214

  Fly   251 YGKNGTSSDRVTVNTGVDDIRRYGI----------IDNFNGRTHLPHWTTD------ACNTLAGT 299
            ..:.|..|:...:|. .:...:||:          :|:.||......|..:      .||.:.|:
  Fly   215 LFREGNESNVFNMNL-PEPKDKYGMRMTDAPRGYTVDSINGERGFKGWQYNEETNGTMCNRIWGS 278

  Fly   300 -DGSIFPPHIDHDRILHVYDKDLCRLLPLVFEKEVMTSNEVPGYRFT-PPEWVFADVDSHPDNMC 362
             |.::||..:|.:....:|.:..||.||:.|.: ..|.|.:..:.|. .|:...::|| :.::.|
  Fly   279 HDATLFPLDMDENDEFFLYRRTFCRRLPVKFNR-TTTFNGLDAFEFVMEPDSFDSEVD-NANSSC 341

  Fly   363 FCPAGKPSCSPNGLFNVSLCQYDSPIMLSFPHFYLADESLRTQVEGISPPMKEKHQFFFDVQPKM 427
            :|...:  |...|:.|||.|.|:.|:.:::|||..||.||....:|:.|.: .:....|.|||::
  Fly   342 YCKNNR--CLKKGVGNVSPCYYNIPLAITYPHFMHADPSLLEPFDGLQPNV-SRFTSTFVVQPQL 403

  Fly   428 GTTLR-VRARIQINLAVSQVFDIKQVANFPDIIFPILWFEEGIDNLPDEVTDLMRFAEQVPPKIR 491
            |..:: ...|:|.|..|.:|...:.:..|.::|.|:||.:..||.|...:..|:...:...|.::
  Fly   404 GAPMQGTHLRLQANQVVGKVNFNRMMTPFENMILPLLWVDLNIDVLCLTLRLLIHGIKWGFPLLQ 468

  Fly   492 VALIVGLCALGVILL 506
            .:..:|:...||..|
  Fly   469 WSAALGMLLAGVYQL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
empNP_726504.2 CD36 58..511 CDD:279474 135/470 (29%)
CG10345NP_650563.2 CD36 21..488 CDD:279474 135/470 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450693
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
65.850

Return to query results.
Submit another query.