DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment emp and CG3829

DIOPT Version :9

Sequence 1:NP_726504.2 Gene:emp / 37999 FlyBaseID:FBgn0010435 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_001286874.1 Gene:CG3829 / 38000 FlyBaseID:FBgn0035091 Length:597 Species:Drosophila melanogaster


Alignment Length:524 Identity:162/524 - (30%)
Similarity:257/524 - (49%) Gaps:63/524 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 TIVVAAALIIGGIVVACEFTVL------IDAVVDRMVALRPGAKTFGWWAKPPVEPR----ISLY 108
            |:::...:.:..::....|.|:      .:.:::.:: |...:.|...|..|  :|:    :..:
  Fly    83 TLIMLGVMFLLFVISVTGFFVMWFTEYYNNTILENLI-LAENSDTANSWLNP--DPKYDTLLKAH 144

  Fly   109 IYNVTNADDFLS-NGSKAIVDEVGPYVYSETWEKVNIVENDNGTLSYNLRKIYSFREDLSVGPED 172
            |::..|.||:|: ...|..|.:|||..|.|...|..:..|.|.|:|:..||.|.|..:.|...|.
  Fly   145 IFHYPNIDDYLAGRADKIKVVDVGPLTYQEHTVKDEVSFNKNFTVSFRDRKSYKFLPEKSSIGEH 209

  Fly   173 DVVIVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFVQVSVGQLLWGYEDPLLKLAKDVVP 237
            :||.|||:|::||....|....|.|||:::.:...|...|..::|.:.||||||.::||      
  Fly   210 EVVRVPNVPLISAAGPVKRMKAFERLAVSTWIKQFKEPLFKNLTVSEYLWGYEDSIIKL------ 268

  Fly   238 KEQKLPYEEFGLLYGKNGTSSDRVTVNTGVDDIRRYGIIDNFNGRTHLPHWTTDACNTLAGTDGS 302
            |........||||..:||||.|.|.:|||.|||.::.||..|||...|.:|..|.||.:.|::.|
  Fly   269 KSLGRGRRRFGLLMSRNGTSVDSVQLNTGEDDITKFSIITQFNGMPQLDYWEGDECNRIDGSEPS 333

  Fly   303 IFPPHIDHDR-ILHVYDKDLCRLLPLVFEKEVMTSNEVPGYRFTPPEWVFADVDSHPDNMCFCPA 366
            :|.||:..|| .::|:.:.|||.:||.|||||...|::...|:..|..||:....:|.|.|:| .
  Fly   334 MFSPHLLQDRSTVNVFLQVLCRKVPLHFEKEVTIYNDIDVLRYRTPMDVFSHPSKNPANQCYC-Q 397

  Fly   367 GKPSCSPNGLFNVSLCQYDSPIMLSFPHFYLADESLRTQVEGISPPMKEKHQFFFDVQPKMGTTL 431
            ....|.|:|:.|.:.|..|:||..|||||:..|..|....|||.|. ...||.:.|:.|:.|..:
  Fly   398 NTELCLPSGVINATKCYGDAPIFPSFPHFFTGDPVLYQDFEGIEPD-AAVHQTYADIHPRFGFPI 461

  Fly   432 RVRARIQINLAVSQVFDIK----QVANFPDIIFPILWFEEGIDNLPDEVTDLMRFAEQVPPKIRV 492
            ...:|:|||:.:.:...::    ::.|  ..|.|::|.|....:..:||...:..:         
  Fly   462 SGASRVQINIMLDKTPILRNQGDRLKN--TTILPLMWIEITSGDFSEEVLHTLYLS--------- 515

  Fly   493 ALIVGLCAL------GVILLLLSTFCLI------RNSHRQSTL-------HLE----GSNYLATA 534
              ..||.|:      |.:|:.:::|.||      .||.|:..|       .||    |.|.:...
  Fly   516 --TFGLNAIQQTLKYGTLLISVTSFSLIVAGVYYLNSRREQQLQESKTSAELEALNGGENVIVVH 578

  Fly   535 QVDM 538
            .:||
  Fly   579 HIDM 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
empNP_726504.2 CD36 58..511 CDD:279474 148/474 (31%)
CG3829NP_001286874.1 CD36 91..546 CDD:279474 151/478 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450695
Domainoid 1 1.000 168 1.000 Domainoid score I2304
eggNOG 1 0.900 - - E1_KOG3776
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I2746
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
98.900

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