DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment emp and crq

DIOPT Version :9

Sequence 1:NP_726504.2 Gene:emp / 37999 FlyBaseID:FBgn0010435 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_001245823.1 Gene:crq / 33219 FlyBaseID:FBgn0015924 Length:491 Species:Drosophila melanogaster


Alignment Length:478 Identity:127/478 - (26%)
Similarity:228/478 - (47%) Gaps:39/478 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 CTKLSSTYLRKWWITIVVAAALIIGGIVVACEFTVLIDAVVDRMVALRPGAKTFGWWAKPPVEPR 104
            |.|......||.|: ..:.:..::.||::...:..:.|.:|:..:.|:||...:..|.:.|:...
  Fly     2 CCKCCGETQRKVWV-FGLGSVFLLLGILIVVFWPGIADNLVEDGLTLKPGTDAYESWLEAPIPIY 65

  Fly   105 ISLYIYNVTNADDFLSNGSKAIVDEVGPYVYSETWEKVNIVENDNGTLSYNLRKIYSFREDLSVG 169
            :|.|::|.||.:|..:...|....|:|||.:.|..:|.|....||.|::|..|:.:.|..:.|.|
  Fly    66 LSFYMFNWTNPEDIRNPDIKPNFVEMGPYTFLEKHKKENYTFYDNATVAYYERRTWFFDPERSNG 130

  Fly   170 PEDDVVIVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFVQVSVGQLLW-GYEDPLLKLAK 233
            ..||:|...:....:...:.:...:.::..:..:::....|.:|...||:.:: ||:|.:.....
  Fly   131 TLDDMVTAAHAITATVADEMRDQRKIVKKIINFMLNHEGGKLYVTKPVGEWIFEGYQDNITDFLN 195

  Fly   234 DVVPKEQKLPYEEFGLLYGKNG--TSSDRVTVNTGVDDIRRYGIIDNFNGRTHLPHWTTDACNTL 296
            .....:..:||:.||.|..:|.  |.....|::||.|||...|.:.::||::....:.. .|..:
  Fly   196 LFNTTKIDIPYKRFGWLADRNESLTYDGLFTIHTGTDDISNLGRLTHWNGKSETGFYEM-PCGIV 259

  Fly   297 AGTDGSIFPPHIDHDRILHVYDKDLCRLLPL----VFEKEVMTSNEVPGYRFTPPEWVFAD--VD 355
            .||.|.:|||.::.:..:.::..|.||.:.|    .:|...:|:.          :||..:  :|
  Fly   260 NGTTGDMFPPKMNVNDEITIFATDACRFMNLRPRGTYENHGLTAT----------KWVGTEETLD 314

  Fly   356 S---HPDNMCFCPAGK-PSCSPNGLFNVSLCQYDSPIMLSFPHFYLADESLRTQVEGISPPMKEK 416
            |   :|:..|||...: ..|...|:.....|:..:||..|||||||||:|....|.|:.|. |||
  Fly   315 SGENYPNQACFCDEARFDECPKTGVVECKACRDKAPIYSSFPHFYLADQSYVDAVSGMKPE-KEK 378

  Fly   417 HQFFFDVQPKMGTTLRVRARIQINLAVSQVFDIKQVANFPDIIFPILWFEEGIDNLPDEVTDLMR 481
            |:||..|:|..|..::|..|||||:.:....|.........::.|:.||        |:..:|  
  Fly   379 HEFFLAVEPITGVPVQVHGRIQINMMIEPDDDFDIYRGVQKVLMPMFWF--------DQYAEL-- 433

  Fly   482 FAEQVPPKIRVALIVGLCALGVI 504
             :.::..|.::|  :.|.:.|:|
  Fly   434 -SSELASKAKLA--INLSSYGII 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
empNP_726504.2 CD36 58..511 CDD:279474 122/460 (27%)
crqNP_001245823.1 CD36 19..470 CDD:307331 122/460 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450718
Domainoid 1 1.000 248 1.000 Domainoid score I2091
eggNOG 1 0.900 - - E1_KOG3776
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5605
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm4750
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
98.800

Return to query results.
Submit another query.