DRSC/TRiP Functional Genomics Resources

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Protein Alignment emp and scav-3

DIOPT Version :9

Sequence 1:NP_726504.2 Gene:emp / 37999 FlyBaseID:FBgn0010435 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_499625.2 Gene:scav-3 / 176673 WormBaseID:WBGene00013039 Length:534 Species:Caenorhabditis elegans


Alignment Length:552 Identity:146/552 - (26%)
Similarity:251/552 - (45%) Gaps:95/552 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 AALIIGGIVVACEFTVLIDAVVDRMVALR------------------PGAKTFGWWAKPPVEPRI 105
            :|:|:|.::.|....:||...:||:|..:                  |.|.|.. |.||....::
 Worm    11 SAIILGLLLAAAGVLLLIGIPIDRIVNRQVIDQDFLGYTRDENGTEVPNAMTKS-WLKPLYAMQL 74

  Fly   106 SLYIYNVTNADDFLSNGSKAIVDEVGPYVYSETWEKVNIVENDNGT-LSYNLRKIYSFREDLSVG 169
            :::::||||.|..|....|..:.|:||:|:.|..|||.....||.| :.|..:|:|.|.::.|. 
 Worm    75 NIWMFNVTNVDGILKRHEKPNLHEIGPFVFDEVQEKVYHRFADNDTRVFYKNQKLYHFNKNASC- 138

  Fly   170 PE---DDVVIVPNI---PMLSATSQSKHAARFLRLAMASIMDILKIKPFVQVSVGQLLW-GYEDP 227
            |.   |..|.:|||   .::.|...:....| ::.|:.|::.::...|::.|.|...|: |||||
 Worm   139 PTCHLDMKVTIPNIVFQKLIDAADVTIFGVR-IKFAIESVLKMVSEAPYITVKVSDALFDGYEDP 202

  Fly   228 LLKLAKDVVPKEQKLPY--------EEFGLLYGKNGTSSDRVTVNTGVDDIRRYGIIDNFNGRTH 284
            ::    |:|.|.:.|.:        ...|..||:|||:.....|:.||....:.|.:..:|..|.
 Worm   203 II----DIVCKNKILQFLCETNSLQRRVGFFYGQNGTTDGIYEVDAGVPSPSKIGHLYTWNNMTE 263

  Fly   285 LPH--WTTDACNTLAGTDGSIFPPHIDHDRILHVYDKDLCRLLPLVFEKEVMTSNEVPGYRFTPP 347
            :|.  |.|.....:.||||.:|.|.:..:..|.::...:||.:.:.:.|:|.. |.||.:|:.||
 Worm   264 MPEGTWDTKYARMINGTDGQLFSPMLKREDRLTIFVPQICRSIQMEYTKDVAV-NGVPSWRYAPP 327

  Fly   348 EWVFADVDSH----PDNMCFC-PAGKP-----------SCSPNGLFNVSLCQYDSP-IMLSFPHF 395
                  :|.:    |.|..|| ..|.|           :|.|.||.::|.||..:| :.||.|||
 Worm   328 ------LDLYDPALPQNRAFCNKNGMPRYFDNTTVQIENCLPAGLIDLSRCQAGNPRVYLSNPHF 386

  Fly   396 YLADESLRTQVEGISPPMKEKHQFFFDVQPKMGTTLRVRARIQINLAVSQVFDIKQVANFPDIIF 460
            |.:...|...|.|:|.|.........|::|..|...:.:..:|||:.:.: ..:....|..:::.
 Worm   387 YNSPMELWHSVTGLSVPTASNDLTVVDIEPTAGVPTQAKRIMQINVGMVK-GSLSVTENTTNVVV 450

  Fly   461 PILW------FEEGIDNLPDEVTDLMRFAEQVPPKIRVALIVGLCALGV-ILLLLSTFCLIRNSH 518
            |:||      |::|   ..|::.::....       ..:.|.|:.:|.: ::..|:.|.:|....
 Worm   451 PVLWMNETAYFDQG---TRDQLINIFNAK-------HYSFIGGVISLSLGLIAWLAVFVVIIVYS 505

  Fly   519 RQSTLHLEGSNYLATAQVDMNKKQNKDNQPAR 550
            |||.....|...|          :::|.:||:
 Worm   506 RQSDEEEYGRLVL----------EDEDEEPAQ 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
empNP_726504.2 CD36 58..511 CDD:279474 136/511 (27%)
scav-3NP_499625.2 CD36 52..499 CDD:279474 127/471 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 168 1.000 Domainoid score I2304
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 171 1.000 Inparanoid score I2746
Isobase 1 0.950 - 0 Normalized mean entropy S5605
OMA 1 1.010 - - QHG45589
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 1 1.000 - - mtm4750
orthoMCL 1 0.900 - - OOG6_103616
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.830

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