DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment emp and Cd36

DIOPT Version :9

Sequence 1:NP_726504.2 Gene:emp / 37999 FlyBaseID:FBgn0010435 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_001153027.1 Gene:Cd36 / 12491 MGIID:107899 Length:472 Species:Mus musculus


Alignment Length:468 Identity:142/468 - (30%)
Similarity:234/468 - (50%) Gaps:29/468 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 IVVAAALIIGGIVVACEFTVLIDAVVDRMVALRPGAKTFGWWAKPPVEPRISLYIYNVTNADDFL 119
            ::.|...:.|||::... .:||:..:.|.|.|..|...|..|.|.........:|::|.|.||..
Mouse    14 VIGAVLAVFGGILMPVG-DMLIEKTIKREVVLEEGTTAFKNWVKTGTTVYRQFWIFDVQNPDDVA 77

  Fly   120 SNGSKAIVDEVGPYVYSETW-EKVNIVEN-DNGTLSYNLRKIYSFREDLSVGPEDDVVIVPNIPM 182
            .|.||..|.:.|||.|...: .|.||.:: ::.|:|:.......|...||||.|||...|.|:.:
Mouse    78 KNSSKIKVKQRGPYTYRVRYLAKENITQDPEDHTVSFVQPNGAIFEPSLSVGTEDDNFTVLNLAV 142

  Fly   183 LSATSQSKHAARFLRLAMASIMDILKIKPFVQVSVGQLLWGYEDPLLKLAKDVVPKEQKLPY--- 244
            .:|....:::  |:::.:.|::...|...|...|:.:|||||:||.|.|          :||   
Mouse   143 AAAPHIYQNS--FVQVVLNSLIKKSKSSMFQTRSLKELLWGYKDPFLSL----------VPYPIS 195

  Fly   245 EEFGLLYGKNGTSSDRVTVNTGVDDIRRYGIIDNFNGRTHLPHWTTDACNTLAGTDGSIFPPHID 309
            ...|:.|..|.|......|..|.|:|.:..||:::.|:.:|.:|.: .|:.:.|||.:.|||.::
Mouse   196 TTVGVFYPYNDTVDGVYKVFNGKDNISKVAIIESYKGKRNLSYWPS-YCDMINGTDAASFPPFVE 259

  Fly   310 HDRILHVYDKDLCRLLPLVFEKEVMTSNEVPGYRFTPPEWVFADVDSHPDNMCFCPAG--KPSCS 372
            ..|.|..:..|:||.:..||..|:.... :|.|||..|...||....:|||.|||...  ..:|:
Mouse   260 KSRTLRFFSSDICRSIYAVFGSEIDLKG-IPVYRFVLPANAFASPLQNPDNHCFCTEKVISNNCT 323

  Fly   373 PNGLFNVSLCQYDSPIMLSFPHFYLADESLRTQVEGISPPMKEKHQFFFDVQPKMGTTLRVRARI 437
            ..|:.::..|:...|:.:|.|||..|...:...:||:. |.:::|:.:.||:|..|.||:...|:
Mouse   324 SYGVLDIGKCKEGKPVYISLPHFLHASPDVSEPIEGLH-PNEDEHRTYLDVEPITGFTLQFAKRL 387

  Fly   438 QINLAVSQVFDIKQVANF--PDIIFPILWFEEGIDNLPDEVTDLMRFAEQVPPKIRVALIVGLCA 500
            |:|:.|.....|:.:.|.  |.|: ||||..| ...:.||..::  |..||..||::..:|.:..
Mouse   388 QVNILVKPARKIEALKNLKRPYIV-PILWLNE-TGTIGDEKAEM--FKTQVTGKIKLLGMVEMAL 448

  Fly   501 LGVILLLLSTFCL 513
            ||:.:::...|.:
Mouse   449 LGIGVVMFVAFMI 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
empNP_726504.2 CD36 58..511 CDD:279474 141/461 (31%)
Cd36NP_001153027.1 CD36 16..463 CDD:366481 142/466 (30%)
Required for interaction with thrombospondins, THBS1 and THBS2. /evidence=ECO:0000269|PubMed:15748999 93..120 6/26 (23%)
Interaction with PTK2, PXN and LYN. /evidence=ECO:0000250|UniProtKB:P16671 460..472 0/2 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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