DRSC/TRiP Functional Genomics Resources

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Protein Alignment emp and cd36

DIOPT Version :9

Sequence 1:NP_726504.2 Gene:emp / 37999 FlyBaseID:FBgn0010435 Length:551 Species:Drosophila melanogaster
Sequence 2:NP_001107151.1 Gene:cd36 / 100135002 XenbaseID:XB-GENE-493679 Length:470 Species:Xenopus tropicalis


Alignment Length:488 Identity:152/488 - (31%)
Similarity:234/488 - (47%) Gaps:41/488 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KWWITI--VVAAAL-IIGGIVVACEFTV---LIDAVVDRMVALRPGAKTFGWW--AKPPVEPRIS 106
            |.|:.:  |:...| |:|||:    |.|   :|:..:.....:..|...:..|  |..||...  
 Frog     6 KCWLIVGSVIGGLLAILGGIL----FPVGDMIINKEISTEAVIEEGTIAYENWIEAGSPVYRH-- 64

  Fly   107 LYIYNVTNADDFLSNGSKAIVDEVGPYVYSETW-EKVNIVENDNGTLSYNLRKIYSFREDLSVGP 170
            .:||:|||.|:.: ||.|.|:.:.|||.|...: .|.||.:.:|.|:||.......|:.:.|.||
 Frog    65 FWIYHVTNPDEII-NGGKPILQQKGPYTYRVRYLPKENITQLENNTVSYWQPNGAIFQREGSYGP 128

  Fly   171 EDDVVIVPNIPMLSATSQSKHAARFLRLAMASIMDILKIKPFVQVSVGQLLWGYEDPLLKLAKDV 235
            |:|...|.|:.:.:|.:........|...:.|....|    |...||.:|||||.||.|      
 Frog   129 EEDTYTVLNLAVAAAPAMFPALQGLLNAIIKSSNSSL----FQVRSVKELLWGYRDPFL------ 183

  Fly   236 VPKEQKLPYEEF----GLLYGKNGTSSDRVTVNTGVDDIRRYGIIDNFNGRTHLPHWTTDACNTL 296
                :|:|.:..    ||.|..|||:.....|..|..||.:..|||.:.....||:|..|.|:.:
 Frog   184 ----EKIPIDSIDKTTGLFYPNNGTADGIYHVYNGKGDISKVAIIDRYKEAKALPYWNDDFCDMI 244

  Fly   297 AGTDGSIFPPHIDHDRILHVYDKDLCRLLPLVFEKEVMTSNEVPGYRFTPPEWVFADVDSHPDNM 361
            .|||.:.|||.:..|:.|:.:..::||.:..:||||.|... :..|||...|...|....:|||.
 Frog   245 NGTDAASFPPSVKKDKRLYFFSSEICRSIYGIFEKEYMVKG-IKLYRFVVTEDAMASPTKNPDNH 308

  Fly   362 CFCPAGKPS--CSPNGLFNVSLCQYDSPIMLSFPHFYLADESLRTQVEGISPPMKEKHQFFFDVQ 424
            |||...:.|  |:..|:.::..||...||.||.|||..|.:.|...|.|:. |.||:|:.:.||:
 Frog   309 CFCKDFQLSRNCTAAGVLDLRSCQGGKPIFLSLPHFLYASDYLLDSVSGLK-PNKEEHETYIDVE 372

  Fly   425 PKMGTTLRVRARIQINLAVSQVFDIKQVANF-PDIIFPILWFEEGIDNLPDEVTDLMRFAEQVPP 488
            |..|.|:....|:|:|:.:.....|:.::.. .:::||:.|..| ...:.|:..::.:.....|.
 Frog   373 PITGFTMHFAKRLQVNVMIQPTDKIEVMSKLQSELVFPVAWLNE-TALIGDDSANMFKSKVTTPM 436

  Fly   489 K-IRVALIVGLCALGVILLLLSTFCLIRNSHRQ 520
            | :.:..||.||...|:.|..|....:|.|.:|
 Frog   437 KVVEILRIVLLCVGSVVFLACSITLCVRGSKKQ 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
empNP_726504.2 CD36 58..511 CDD:279474 146/467 (31%)
cd36NP_001107151.1 CD36 16..459 CDD:366481 145/466 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 1 1.000 - - FOG0000618
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X155
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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