DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2736 and scarb2

DIOPT Version :9

Sequence 1:NP_611991.1 Gene:CG2736 / 37998 FlyBaseID:FBgn0035090 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001016557.1 Gene:scarb2 / 549311 XenbaseID:XB-GENE-948022 Length:483 Species:Xenopus tropicalis


Alignment Length:411 Identity:99/411 - (24%)
Similarity:161/411 - (39%) Gaps:60/411 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILLCLILACVNVFLFVVSWGVDYRILVAREHIRFRQEMPTMDSWINSPFG-KLKNYVFNVTNAEE 72
            :::.::|...:.|:.:|...|       ::.|..:.|....:.|.|.|.. .::.|.|||||..|
 Frog    17 LIVSIVLLLTHTFMDIVEGQV-------KQAIVLKNESEVFEDWANPPPPVYMQFYFFNVTNPLE 74

  Fly    73 FRSGRDSRLKVKEIGPIVYRIVGFNDILDRNETNVRYRKHRYRV-------VEFLPEESVAPDVL 130
            ..||  .:..|.||||..||..       |...|:.:..:...|       ..|.||:|:....:
 Frog    75 VLSG--EKPFVDEIGPYTYREY-------RPRENITFSVNGTEVSAVTPKTYVFEPEKSIGDPKV 130

  Fly   131 NWTITSTNNVILGAATKVKHTAPLAAFGFDAAL--MMEDIFVTDSVYYFLWEFTRPLLQTLSRI- 192
            : .|.:.|..::......|.::.|..| ..|||  ..|.:|||.:|...||.:...:|..|... 
 Frog   131 D-LIRTVNIPLVTILEMTKDSSLLRPF-IIAALKTYKEGMFVTRTVDELLWGYKDAVLSILHPFK 193

  Fly   193 SNIRPNVAVLYNALKEKEEVYTVNIGPKRGIENFFRIETLNGEVIIREQLPHTRQYDSNSCPFNV 257
            .||.....:.|......:..|....|.|..:| |.:|....|:..:       ..:.:.:|  |:
 Frog   194 KNISDTFGLFYKMNTTDDGEYIFLSGEKDYLE-FTQIAEWKGQKAL-------NWWTTETC--NM 248

  Fly   258 SGALDNSLFPPFVQPDTPLSIVAIESCRVLPLTYQRQERYNGLDTFRYTLLQSHQKPPGCLDTSY 322
            ....|.:.|.|.:..|..:.:.:.:.||.:...|:..|....:..||::       ||..:..:.
 Frog   249 INGTDGTSFHPLLNKDDTIYMFSSDLCRSIYAVYESSENIKDISVFRFS-------PPASVFANV 306

  Fly   323 GVK-------------LPDGMFDVSQCVINDAPSAFSMPHFYGSSYNWSQHYEGYTPNAEDHEPY 374
            .|.             ||.|:.:||.|. ..||...|.||||.:..|......|..|..|.|..:
 Frog   307 SVNPQNKGFCVPEGNCLPSGLLNVSICK-EGAPIVLSSPHFYQADENVINSIRGMKPVKEHHMTF 370

  Fly   375 ILLEPVTGIPVTEKYRFQSNI 395
            :.|.|:||..:....|.|.|:
 Frog   371 LDLNPLTGTLIQAAKRIQVNV 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2736NP_611991.1 CD36 10..462 CDD:279474 99/410 (24%)
scarb2NP_001016557.1 CD36 29..460 CDD:366481 98/399 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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