DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG2736 and Snmp1

DIOPT Version :9

Sequence 1:	NP_611991.1	Gene:	CG2736 / 37998	FlyBaseID:	FBgn0035090	Length:	507	Species:	Drosophila melanogaster
Sequence 2:	NP_001262803.1	Gene:	Snmp1 / 42514	FlyBaseID:	FBgn0260004	Length:	551	Species:	Drosophila melanogaster

Alignment Length:	512	Identity:	119/512 - (23%)
Similarity:	201/512 - (39%)	Gaps:	102/512 - (19%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 VQWVKILLCLILACVNVFLFVVSWGVDYRIL--VAREHIRFRQEMPTMDSWINSPFG-KLKNYVF 65
            :|..::.|.:....:.||..:..|.:..:||  :..:.:..:......:.|.|:||. ....|||
  Fly     1 MQVPRVKLLMGSGAMFVFAIIYGWVIFPKILKFMISKQVTLKPGSDVRELWSNTPFPLHFYIYVF 65

  Fly    66 NVTNAEEFRSGRDSRLKVKEIGPIVYRIVGFNDILDRNETNVRYRKHRYRVVEFLPEESVAPDVL 130
            ||||.:|...|...||  :|:||.|     |::..|:.:.                |:.|..|.:
  Fly    66 NVTNPDEVSEGAKPRL--QEVGPFV-----FDEWKDKYDL----------------EDDVVEDTV 107

  Fly   131 NWT--------------ITSTNNVIL--------GAATKVKHTAPLA------------AFGFDA 161
            ::|              :|....:||        |.:.:.:..|.:.            |..|..
  Fly   108 SFTMRNTFIFNPKESLPLTGEEEIILPHPIMLPGGISVQREKAAMMELVSKGLSIVFPDAKAFLK 172

  Fly   162 ALMMEDIFVTDSVYYFLWEFTRPLLQTLSRISNIRPNVAV-----LYNALKEKEEVYTVNIGPKR 221
            |..|:..|...:|.....||:...|.|:.....|:....|     |::.:.:.....:......|
  Fly   173 AKFMDLFFRGINVDCSSEEFSAKALCTVFYTGEIKQAKQVNQTHFLFSFMGQANHSDSGRFTVCR 237

  Fly   222 GIENFFRIETLNGEVIIREQLPHTRQYDSNSCPFNVSGALDNSLFPPFVQPDTPLSIVAIESCRV 286
            |::|..::    |:|:.....|....:....|  |.....|:::|.|.::.:..|.....:.||.
  Fly   238 GVKNNKKL----GKVVKFADEPEQDIWPDGEC--NTFVGTDSTVFAPGLKKEDGLWAFTPDLCRS 296

  Fly   287 LPLTYQRQERYNGLDTFRYTL----LQSHQK------PPGCLDTSYGVKLPDGMFDVSQCVINDA 341
            |...||.:..|:|:.:.||||    :::.:|      .|..|||.    .|.|..:::.||  ..
  Fly   297 LGAYYQHKSSYHGMPSMRYTLDLGDIRADEKLHCFCEDPEDLDTC----PPKGTMNLAACV--GG 355

  Fly   342 PSAFSMPHFYGSSYNWSQHYEGYTPNAEDHEPYILLEPVTGIPVTEKYRFQSNIPIPDLRRFSSR 406
            |...||||||..........:|..||.:||..||..|.::|.|.....|.|.|:.:..:.....
  Fly   356 PLMASMPHFYLGDPKLVADVDGLNPNEKDHAVYIDFELMSGTPFQAAKRLQFNLDMEPVEGIEP- 419

  Fly   407 LSRFSNMMIPSFWYEFEMGQLPGFVTSLMWINVNIVQHIQPYCMVLFLVLALWSVLK 463
            :.....:::|.||.| |..||....|       |:|::      .|||.|.:.|||:
  Fly   420 MKNLPKLILPMFWVE-EGVQLNKTYT-------NLVKY------TLFLGLKINSVLR 462

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG2736	NP_611991.1	CD36	10..462	CDD:279474	116/503 (23%)
Snmp1	NP_001262803.1	CD36	12..478	CDD:279474	117/501 (23%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45450727
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3776
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1106566at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR11923
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	5	4.850