DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2736 and Scarb1

DIOPT Version :9

Sequence 1:NP_611991.1 Gene:CG2736 / 37998 FlyBaseID:FBgn0035090 Length:507 Species:Drosophila melanogaster
Sequence 2:XP_038945027.1 Gene:Scarb1 / 25073 RGDID:2302 Length:516 Species:Rattus norvegicus


Alignment Length:341 Identity:77/341 - (22%)
Similarity:143/341 - (41%) Gaps:60/341 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 ALMMED-------------------IFVTDSVYYFLWEFTRPLLQTLSR----ISNIRPNVAVLY 203
            |:||||                   .|:..:|...||.:..|.:..||:    :..|:....:..
  Rat   152 AVMMEDKPTSLKLLMTLGLVTMGQRAFMNRTVGEILWGYEDPFVNFLSKYFPDMFPIKGKFGLFV 216

  Fly   204 NALKEKEEVYTVNIGPKRGIENFFRIETL---NGEVIIREQLPHTRQYDSNSCPFNVSGALDNSL 265
            ........|:||    ..|::||.:|..:   ||       |.....:.|..|  |:.......:
  Rat   217 GMNDSSSGVFTV----FTGVQNFSKIHLVDKWNG-------LSEVNYWHSEQC--NMINGTAGQM 268

  Fly   266 FPPFVQPDTPLSIVAIESCRVLPLTYQRQERYNGLDTFRYTLLQSHQKPPGCLDTSYGVKLPD-- 328
            :.||:.|::.|...:.|:||.:.||||....:.|:.|:|:|       .|..|..:..|..|:  
  Rat   269 WAPFMTPESSLEFFSPEACRSMKLTYQESRVFEGIPTYRFT-------APDTLFANGSVYPPNEG 326

  Fly   329 -------GMFDVSQCVINDAPSAFSMPHFYGSSYNWSQHYEGYTPNAEDHEPYILLEPVTGIPVT 386
                   |:.:||.|... ||...|.||||.:....|:...|..|:.::|..::.:.||||||:.
  Rat   327 FCPCRESGIQNVSTCRFG-APLFLSQPHFYNADPVLSEAVLGLNPDPKEHSLFLDIHPVTGIPMN 390

  Fly   387 EKYRFQSNIPIPDLRRFSSRLSRFSNMMIPSFWYEFEMGQLPGFVTSLMWINVNIVQHIQPYCMV 451
            ...:.|.::.|..::.. .:..:...:::|..|:| :.|.:.|...:..:..:.::..:..|.. 
  Rat   391 CSVKMQLSLYIKSVKGV-GQTGKIEPVVLPLLWFE-QSGMMGGKTLNTFYTQLVLMPQVLHYAQ- 452

  Fly   452 LFLVLALWSVLKAIRV 467
             :::|.|..:|..:.:
  Rat   453 -YVLLGLGGLLLLVPI 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2736NP_611991.1 CD36 10..462 CDD:279474 76/334 (23%)
Scarb1XP_038945027.1 CD36 <148..454 CDD:395898 74/326 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3776
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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