DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG2736 and scarb1

DIOPT Version :9

Sequence 1:NP_611991.1 Gene:CG2736 / 37998 FlyBaseID:FBgn0035090 Length:507 Species:Drosophila melanogaster
Sequence 2:XP_002935333.1 Gene:scarb1 / 100490714 XenbaseID:XB-GENE-494666 Length:505 Species:Xenopus tropicalis


Alignment Length:509 Identity:124/509 - (24%)
Similarity:216/509 - (42%) Gaps:122/509 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILLCLILACVNVFLFVVSWGVDYRILVAREHIR------FRQEMPTMDSW--INSPFGKLKNYVF 65
            :|..|::....:.:|:|...:|.::   .:::|      |..||     |  :..|| .:..|:|
 Frog    14 VLGVLLVGVGTLLVFLVPVIMDEQV---EKNVRIDPSSGFAYEM-----WRDLPVPF-YMSIYIF 69

  Fly    66 NVTNAEEFRSGRDSRLKVKEIGPIVYRIVGFNDILDRNETNVRYRKH------RYRVVEFLPEES 124
            .|.|.:|...|...:|  :|.||.|||..       :.:.|:.:.::      .:|...|.||:|
 Frog    70 EVVNHKEVLLGEKPQL--QERGPYVYREY-------KKKQNITFNENGTVSFVEFRTFHFDPEKS 125

  Fly   125 --------VAPDVLNWTITSTNNVI--LGAATKVKHTAPLAAFGFDAALMMEDIFVTDSVYYFLW 179
                    :.|::|   :..::.::  ||.|.|...:...:||.       |:.|:..:|...||
 Frog   126 NGKEEDHVIVPNIL---VLGSSVMLQDLGIAIKWIISGAFSAFN-------EEAFINKTVKDILW 180

  Fly   180 EFTRPLLQTLSRISNIRPNVAVLYNALKEKEE-------------VYTVNIGPKRGIENFFRIET 231
            .:..|.|..|:         ..|...|..|.:             |:|||    .|:|:..|::.
 Frog   181 GYEDPFLDFLN---------TFLPGKLPFKGKFGFFSDFNNSNTGVFTVN----TGMEDISRVQM 232

  Fly   232 L---NGEVIIREQLPHTRQYDS-NSCPFNVSGALDNSLFPPFVQPDTPLSIVAIESCRVLPLTYQ 292
            :   ||          .::.|. ||...|:.......::|||.:|..||...:.::||.:.|.|:
 Frog   233 VDNWNG----------LKKVDFWNSEQTNMINGTAGQMWPPFRKPSEPLEFYSPDACRSMKLVYE 287

  Fly   293 RQERYNGLDTFRYT-----LLQSHQKPPG---CLDTSYGVKLPDGMFDVSQCVINDAPSAFSMPH 349
            ::|::.|:.|||||     .......||.   |...:.||:      :||.|..| ||...|.||
 Frog   288 KEEKFRGIPTFRYTAPNYLFANGSDYPPNEGFCPCVASGVQ------NVSACRFN-APLFLSFPH 345

  Fly   350 FYGSSYNWSQHYEGYTPNAEDHEPYILLEPVTGIPVTEKYRFQSNIPIPDLRRFSS---RLSRFS 411
            ||.:...:.:..||..|..|.|..::.:.|:||||:....:.|.|:    |.:..|   :..:..
 Frog   346 FYNADPGFLESVEGLHPTEELHSLFLDMHPLTGIPMNCSIKMQLNM----LTKSVSGIMQTGQIK 406

  Fly   412 NMMIPSFWYEFEMGQLPGFVTS-------LMWINVNIVQHIQPYCMVLFLVLAL 458
            .:::|..|:. |.|.|.|.|.:       ||.|.:..:|::.....:.|:.:||
 Frog   407 PVILPVLWFA-ESGHLDGPVYNTYYNILILMPIVLEYLQYVLIGIGLCFITVAL 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2736NP_611991.1 CD36 10..462 CDD:279474 124/508 (24%)
scarb1XP_002935333.1 CD36 28..461 CDD:366481 122/495 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1106566at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11923
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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