DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL19 and RPL19A

DIOPT Version :9

Sequence 1:NP_476631.1 Gene:RpL19 / 37995 FlyBaseID:FBgn0285950 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_009641.1 Gene:RPL19A / 852379 SGDID:S000002156 Length:189 Species:Saccharomyces cerevisiae


Alignment Length:192 Identity:111/192 - (57%)
Similarity:148/192 - (77%) Gaps:4/192 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRK 65
            |::|:.||||||||:..||:||||||||.:|||..|||..||||:|:|.|:||.|.|||:.|.|.
Yeast     1 MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSRTRA 65

  Fly    66 NTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGN 130
            :.:::|:|||.|:||||||..||:|::::|::|.|||||||.||||:.|||:||||.||.:.|||
Yeast    66 HAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHVLYKESKGN 130

  Fly   131 VFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKED 192
            .||:||.|:|:|.:.||:.||.|.|.::|||||.|.|.||.||.:|:|.|:..|:    |||
Yeast   131 AFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRRAQRVAEKRDALL----KED 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL19NP_476631.1 Ribosomal_L19e_E 4..165 CDD:238705 97/160 (61%)
RPL19ANP_009641.1 Ribosomal_L19e_E 4..166 CDD:238705 97/161 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346490
Domainoid 1 1.000 185 1.000 Domainoid score I676
eggNOG 1 0.900 - - E1_COG2147
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68105
Inparanoid 1 1.050 225 1.000 Inparanoid score I752
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62202
OrthoFinder 1 1.000 - - FOG0001969
OrthoInspector 1 1.000 - - otm46948
orthoMCL 1 0.900 - - OOG6_100773
Panther 1 1.100 - - LDO PTHR10722
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1113
SonicParanoid 1 1.000 - - X979
TreeFam 1 0.960 - -
1514.790

Return to query results.
Submit another query.