DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL19 and AT4G02230

DIOPT Version :9

Sequence 1:NP_476631.1 Gene:RpL19 / 37995 FlyBaseID:FBgn0285950 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_192132.1 Gene:AT4G02230 / 828099 AraportID:AT4G02230 Length:208 Species:Arabidopsis thaliana


Alignment Length:182 Identity:127/182 - (69%)
Similarity:152/182 - (83%) Gaps:4/182 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRK 65
            |.|||||||||:|||:|||:||||||||.::|:..|||||||||:|||.||:||..:|||.|.|:
plant     1 MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARQ 65

  Fly    66 NTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGN 130
            ...|:|||||.|:||||||..||:|||:|||:|.|||||||||||::||||||:|||:|||.|||
plant    66 LNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMYHDMYMKVKGN 130

  Fly   131 VFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARK----RREERIA 178
            ||||||||||.|||.||||.|.|.|:||.||:|.|.:.:|:    |||||:|
plant   131 VFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREERLA 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL19NP_476631.1 Ribosomal_L19e_E 4..165 CDD:238705 117/160 (73%)
AT4G02230NP_192132.1 Ribosomal_L19e_E 4..167 CDD:238705 118/162 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 226 1.000 Domainoid score I674
eggNOG 1 0.900 - - E1_COG2147
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68105
Inparanoid 1 1.050 259 1.000 Inparanoid score I980
OMA 1 1.010 - - QHG62202
OrthoDB 1 1.010 - - D1437042at2759
OrthoFinder 1 1.000 - - FOG0001969
OrthoInspector 1 1.000 - - otm2924
orthoMCL 1 0.900 - - OOG6_100773
Panther 1 1.100 - - O PTHR10722
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X979
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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