DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment RpL19 and Cnbd2

DIOPT Version :9

Sequence 1:	NP_476631.1	Gene:	RpL19 / 37995	FlyBaseID:	FBgn0285950	Length:	203	Species:	Drosophila melanogaster
Sequence 2:	NP_001291297.1	Gene:	Cnbd2 / 296311	RGDID:	1311678	Length:	712	Species:	Rattus norvegicus

Alignment Length:	218	Identity:	41/218 - (18%)
Similarity:	65/218 - (29%)	Gaps:	79/218 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly    49 LIIKKPVVVHSRYRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQR-----VLRRLLKK 108
            |:..||:.||       |.|...|.|...|..:..........|||.:|..|     ...|.:.|
  Rat   441 LLDHKPLRVH-------NNEMSPKERFKEFQIKSYPLQDFTYLKLLRLQEAREQPAMTFHRKINK 498

  Fly   109 YRDS------KKIDRHLYHD--------------------LYMKC----KGNVFKNKRVLMEYIH 143
            ..:|      .|:.....|.                    :|||.    :|:|..|.:..:..||
  Rat   499 AENSLPKLLGPKVKSRYGHSVKCSMVHTKYGELPKEAIVGVYMKVHLTEEGDVVGNHQAFLPEIH 563

  Fly   144 KK--------------KAEKQRSKMLAD-QAEARRQKVREARKRREERIAT-------------- 179
            :.              :..|::...|.| :.:|:..|:.......||...:
  Rat   564 RDPRSFILLSLGTELIRVRKEKFYDLVDAETKAKIMKMDVDYPSDEELCQSFLSENDWSIFRRDL 628

  Fly   180 --------KKQELIALHAKEDEI 194
                    ||:..|.:..|:.||
  Rat   629 LRLLVEPLKKKPFIPIQTKKKEI 651

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
RpL19	NP_476631.1	Ribosomal_L19e_E	4..165	CDD:238705	32/165 (19%)
Cnbd2	NP_001291297.1	CAP_ED	250..349	CDD:237999
Cnbd2	NP_001291297.1	Crp	253..>348	CDD:223736
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910