DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL19 and rpl-19

DIOPT Version :9

Sequence 1:NP_476631.1 Gene:RpL19 / 37995 FlyBaseID:FBgn0285950 Length:203 Species:Drosophila melanogaster
Sequence 2:NP_491608.1 Gene:rpl-19 / 172201 WormBaseID:WBGene00004431 Length:198 Species:Caenorhabditis elegans


Alignment Length:196 Identity:124/196 - (63%)
Similarity:165/196 - (84%) Gaps:0/196 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSRYRVRK 65
            ||:|:||||||::||:|||.:|||||||::||:..||||:||:|:.|||||:|||.||||:|.|:
 Worm     1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSRFRARE 65

  Fly    66 NTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGN 130
            ..||||||||.|:|||:||||||||.|.||::|.||||.||::|||:||:|:||||:||::.|||
 Worm    66 YEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLYHELYLRAKGN 130

  Fly   131 VFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATKKQELIALHAKEDEIA 195
            .||||:.|:|||.|||.|.:|:|.|||||:|||.|.:|:|||||||...|:.||:...::.:::.
 Worm   131 NFKNKKNLIEYIFKKKTENKRAKQLADQAQARRDKNKESRKRREERQVVKRAELLRKISQSEKVI 195

  Fly   196 A 196
            |
 Worm   196 A 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL19NP_476631.1 Ribosomal_L19e_E 4..165 CDD:238705 109/160 (68%)
rpl-19NP_491608.1 Ribosomal_L19e_E 4..167 CDD:238705 110/162 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167219
Domainoid 1 1.000 218 1.000 Domainoid score I1531
eggNOG 1 0.900 - - E1_COG2147
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68105
Inparanoid 1 1.050 269 1.000 Inparanoid score I1843
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62202
OrthoDB 1 1.010 - - D1437042at2759
OrthoFinder 1 1.000 - - FOG0001969
OrthoInspector 1 1.000 - - oto19848
orthoMCL 1 0.900 - - OOG6_100773
Panther 1 1.100 - - LDO PTHR10722
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1113
SonicParanoid 1 1.000 - - X979
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.840

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