DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3770 and lhfpl4b

DIOPT Version :10

Sequence 1:NP_611985.2 Gene:CG3770 / 37991 FlyBaseID:FBgn0035085 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_693927.5 Gene:lhfpl4b / 565558 ZFINID:ZDB-GENE-110216-4 Length:225 Species:Danio rerio


Alignment Length:205 Identity:49/205 - (23%)
Similarity:78/205 - (38%) Gaps:59/205 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVWFLCSLVADMLFAVALVTPRWL---------VGPAQGTDSTASSHHQSSVGIYTRCKVMQEGG 66
            ::|.:|:|...::..|.|:.|.|:         .|||..|         .::|::..|       
Zfish    25 VMWAVCTLCFAVIEVVILIQPSWVGTRELHYRGGGPAPPT---------GTLGLFEVC------- 73

  Fly    67 FQCGRFDLDGLATDSSV------------YPNEWKAAMFFVMLGFSLLSVTVILTLITC-CRQSA 118
                      |.||..|            .|.....|:...|      |:|::...:.| |....
Zfish    74 ----------LETDWPVPECRGSLRTLTPLPAFQSPAVLVCM------SLTMVWASVGCLCLFRF 122

  Fly   119 C-GKSIHNMTACAQVVAGICMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGIIG 182
            | ..:::.:.|..|:.||.|:.|...|.|..|....::.|||.....|.|.:||:..:|...|:|
Zfish   123 CNAATVYKICAWLQLTAGFCLALACVLFPDSWSCAEMRALCGERVSSFSPGNCSVHWAFILAILG 187

  Fly   183 VLLTFTAAGI 192
            ||    .|||
Zfish   188 VL----DAGI 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3770NP_611985.2 L_HMGIC_fpl 10..195 CDD:463019 49/205 (24%)
lhfpl4bXP_693927.5 L_HMGIC_fpl 23..204 CDD:463019 49/205 (24%)

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