DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3770 and lhfpl5a

DIOPT Version :10

Sequence 1:NP_611985.2 Gene:CG3770 / 37991 FlyBaseID:FBgn0035085 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_017213895.1 Gene:lhfpl5a / 558325 ZFINID:ZDB-GENE-110131-8 Length:219 Species:Danio rerio


Alignment Length:187 Identity:46/187 - (24%)
Similarity:85/187 - (45%) Gaps:25/187 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVWFLCSLVADMLFAVALVTPRWLVGPAQGTDSTASSHHQSSVGIYTRCKVMQEGGFQCGRFDLD 75
            ::|.:.::...::..|..:.|.|:   ....|:..|.:    .|::..|    .|....|.....
Zfish    27 VLWTIFTICFAIIGMVVFIQPYWI---GDSVDTPQSGY----FGLFHYC----IGNPITGELVCK 80

  Fly    76 GLATD-SSVYPNEWKAAMFFVMLGFSLLSVT---VILTLITCCRQSACGKSIHNMTACAQVVAGI 136
            |.|.| .|:....:|.|||||  |.|||.:.   |..:|...|...    |::.:.|..|:.|..
Zfish    81 GSALDFGSIPSGAFKTAMFFV--GISLLLIVGTIVCFSLFFFCNSG----SVYKICAWMQLAAAT 139

  Fly   137 CMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGVL----LTFTA 189
            ||::|..::|.||.:..::|:||...:.:...:|::..::...||.::    |:|.|
Zfish   140 CMVIGCMIYPDGWDSEEVKRMCGQRTDKYTLGNCTVRWAYILAIISIMDSLTLSFLA 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3770NP_611985.2 L_HMGIC_fpl 10..195 CDD:463019 46/187 (25%)
lhfpl5aXP_017213895.1 L_HMGIC_fpl 25..202 CDD:463019 46/187 (25%)

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