DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3770 and lhfpl2b

DIOPT Version :9

Sequence 1:NP_001286864.1 Gene:CG3770 / 37991 FlyBaseID:FBgn0035085 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001017562.1 Gene:lhfpl2b / 550224 ZFINID:ZDB-GENE-050417-10 Length:221 Species:Danio rerio


Alignment Length:224 Identity:83/224 - (37%)
Similarity:129/224 - (57%) Gaps:10/224 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCYVIITIASLVWFLCSLVADMLFAVALVTPRWLVGPAQGTD---STASSHH--QSSVGIYTRC- 59
            ||:||:|..|::|.|.|:|......||.::..||||.::|::   :..:||.  |.::|||.|| 
Zfish     1 MCHVIVTCRSMLWTLMSIVVAFAELVAFMSAEWLVGYSEGSELNFTVTASHRSDQRTLGIYNRCL 65

  Fly    60 KVMQEGGFQCGRFDLDGLATDSSVYPNEWKAAMFFVMLGFSLLSVTVILTLITCCRQSACGKSIH 124
            ||.|:...|||.:..|.:...|..    |:|.:.|:::|..||||..||::.:.|.||...|||.
Zfish    66 KVAQQKVVQCGPYATDFMEIASGF----WQATVIFLVIGIFLLSVVGILSVFSMCFQSILKKSIF 126

  Fly   125 NMTACAQVVAGICMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGVLLTFTA 189
            |:....|.:||:.::|||.|:|.||.:.::...||.||..:....||:|.:||..|.|.:|||..
Zfish   127 NVCGLLQGIAGLFLILGLMLYPAGWGSKKVVDYCGPDASAYKVGLCSLGWAFYTAIGGTVLTFIC 191

  Fly   190 AGISLKAESSNMRTRVRRRVEAGSKLVCI 218
            |..|.:||.:....:|:..:|.|..|:|:
Zfish   192 AMFSAQAEIATSSDKVQDEIEEGRSLICV 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3770NP_001286864.1 L_HGMIC_fpl 10..195 CDD:287244 71/190 (37%)
lhfpl2bNP_001017562.1 L_HMGIC_fpl 9..197 CDD:287244 71/191 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582160
Domainoid 1 1.000 123 1.000 Domainoid score I5530
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H100779
Inparanoid 1 1.050 151 1.000 Inparanoid score I4330
OMA 1 1.010 - - QHG49708
OrthoDB 1 1.010 - - D1431349at2759
OrthoFinder 1 1.000 - - FOG0006026
OrthoInspector 1 1.000 - - otm26549
orthoMCL 1 0.900 - - OOG6_109429
Panther 1 1.100 - - O PTHR12489
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5780
SonicParanoid 1 1.000 - - X4322
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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