DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3770 and lhfpl2b

DIOPT Version :10

Sequence 1:NP_611985.2 Gene:CG3770 / 37991 FlyBaseID:FBgn0035085 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001017562.1 Gene:lhfpl2b / 550224 ZFINID:ZDB-GENE-050417-10 Length:221 Species:Danio rerio


Alignment Length:224 Identity:83/224 - (37%)
Similarity:129/224 - (57%) Gaps:10/224 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCYVIITIASLVWFLCSLVADMLFAVALVTPRWLVGPAQGTD---STASSHH--QSSVGIYTRC- 59
            ||:||:|..|::|.|.|:|......||.::..||||.::|::   :..:||.  |.::|||.|| 
Zfish     1 MCHVIVTCRSMLWTLMSIVVAFAELVAFMSAEWLVGYSEGSELNFTVTASHRSDQRTLGIYNRCL 65

  Fly    60 KVMQEGGFQCGRFDLDGLATDSSVYPNEWKAAMFFVMLGFSLLSVTVILTLITCCRQSACGKSIH 124
            ||.|:...|||.:..|.:...|..    |:|.:.|:::|..||||..||::.:.|.||...|||.
Zfish    66 KVAQQKVVQCGPYATDFMEIASGF----WQATVIFLVIGIFLLSVVGILSVFSMCFQSILKKSIF 126

  Fly   125 NMTACAQVVAGICMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGVLLTFTA 189
            |:....|.:||:.::|||.|:|.||.:.::...||.||..:....||:|.:||..|.|.:|||..
Zfish   127 NVCGLLQGIAGLFLILGLMLYPAGWGSKKVVDYCGPDASAYKVGLCSLGWAFYTAIGGTVLTFIC 191

  Fly   190 AGISLKAESSNMRTRVRRRVEAGSKLVCI 218
            |..|.:||.:....:|:..:|.|..|:|:
Zfish   192 AMFSAQAEIATSSDKVQDEIEEGRSLICV 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3770NP_611985.2 L_HMGIC_fpl 10..195 CDD:463019 71/190 (37%)
lhfpl2bNP_001017562.1 L_HMGIC_fpl 9..197 CDD:463019 71/191 (37%)

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