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Protein Alignment CG3770 and Lhfpl6
DIOPT Version :9
Sequence 1: | NP_001286864.1 |
Gene: | CG3770 / 37991 |
FlyBaseID: | FBgn0035085 |
Length: | 219 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001102653.1 |
Gene: | Lhfpl6 / 499615 |
RGDID: | 1560177 |
Length: | 200 |
Species: | Rattus norvegicus |
Alignment Length: | 186 |
Identity: | 43/186 - (23%) |
Similarity: | 79/186 - (42%) |
Gaps: | 14/186 - (7%) |
- Green bases have known domain annotations that are detailed below.
Fly 6 ITIASLVWFLCSLVADMLFAVALVTPRWLVGPAQGTDSTASSHHQSSVGIYTRCKVMQEGGFQCG 70
:|...::|.|.|.::.....|....|.||.|...|...:..:..:.|..::...:.|.....:||
Rat 5 LTCTGVIWALLSFLSAATSCVGFFMPYWLWGSQLGKPVSFGTFRRCSYPVHDESRQMMVMVEECG 69
Fly 71 RFDLDGLATDSSVYPNEWKAAMFFVMLGFSLLSVTVILTLITCCRQSACGKSIHNMTACAQVVAG 135
|: |:...:...||:.......||..||.:..:..|:.||......:::..:....|.:.|
Rat 70 RY-----ASFQGIPSTEWRICTIVTGLGCGLLLLVALTALMGCCVSELISRTVGRVAGGIQFLGG 129
Fly 136 ICMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGVLLTFTAAG 191
:.:..|..|:|:||.:..:::.||..::.|....|.||.::|| |.||
Rat 130 LLIGAGCALYPLGWDSEEVRQTCGYISDQFDLGKCEIGWAYYC---------TGAG 176
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166342111 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4026 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.740 |
|
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