DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3770 and lhfpl6

DIOPT Version :9

Sequence 1:NP_001286864.1 Gene:CG3770 / 37991 FlyBaseID:FBgn0035085 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001008653.1 Gene:lhfpl6 / 494110 ZFINID:ZDB-GENE-041212-82 Length:200 Species:Danio rerio


Alignment Length:200 Identity:51/200 - (25%)
Similarity:82/200 - (41%) Gaps:32/200 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ITIASLVWFLCSLVADMLFAVALVTPRWLVGPAQGTDSTASSHHQSSVGIYTRCK---------- 60
            :|.|.::|.|.|.:......|....|.||:|...|        ...|.|.:.||.          
Zfish     5 LTCAGVIWALLSFLCAATSCVGFFMPYWLLGSQMG--------KPVSFGTFRRCSYPIRDEARGG 61

  Fly    61 -VMQEGGFQCGRFDLDGLATDSSVYPNEWKAAMFFVMLGFSLLSVTVILTLITCCRQSACGKSIH 124
             ||.|   ||||:     |:...:...||:.......:|..||.:..:..::.||......::|.
Zfish    62 TVMLE---QCGRY-----ASFQGIPSLEWRICTVVTGIGCGLLLLVALTAIMGCCVTDLISRTIG 118

  Fly   125 NMTACAQVVAGICMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGIIG-----VL 184
            .:....|.|.|:.:..|..|:|:||.:..:::.|...::.|....|.||.::||...|     ||
Zfish   119 RVAGGIQFVGGLLIGSGCALYPLGWDSEEVRQTCSNSSDQFDLGSCEIGWAYYCTGAGAAAAMVL 183

  Fly   185 LTFTA 189
            .|:.|
Zfish   184 CTWMA 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3770NP_001286864.1 L_HGMIC_fpl 10..195 CDD:287244 48/195 (25%)
lhfpl6NP_001008653.1 L_HGMIC_fpl 9..193 CDD:287244 48/195 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582162
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4026
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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