DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3770 and lhfpl3

DIOPT Version :9

Sequence 1:NP_001286864.1 Gene:CG3770 / 37991 FlyBaseID:FBgn0035085 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001003444.1 Gene:lhfpl3 / 445050 ZFINID:ZDB-GENE-040801-180 Length:216 Species:Danio rerio


Alignment Length:190 Identity:44/190 - (23%)
Similarity:89/190 - (46%) Gaps:31/190 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVWFLCSLVADMLFAVALVTPRWLVGPAQGTDSTASSHHQSSVGIYTRCKVMQEGGFQCGRFDLD 75
            ::|.:.:.:..::..|..|.|.|:   ..|.|:..:.:    .|::..|    .|..........
Zfish    24 VLWAIFTTLFAIVNVVCFVQPYWI---GDGMDTPQAGY----FGLFHYC----IGSGMSRDLTCQ 77

  Fly    76 GLATD-SSVYPNEWKAAMFFVMLGFSLLSVTVILTLITC------CRQSACGKSIHNMTACAQVV 133
            |..|: .|:..:.:|||.||:.     :|:.::|:.|.|      |..:    :::.:....|:.
Zfish    78 GSFTEFGSIPSSAFKAASFFIG-----MSMVLVLSCIGCFALFFFCSTA----TVYKICGWMQLA 133

  Fly   134 AGICMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGVL----LTFTA 189
            ||.|::||..::|.||.|:.::|:||...:.:....||:..::...|:|:|    |:|.|
Zfish   134 AGTCLVLGCMIYPDGWDADEVKRMCGEGTDKYTIGACSVRWAYILAIMGILDALILSFLA 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3770NP_001286864.1 L_HGMIC_fpl 10..195 CDD:287244 44/190 (23%)
lhfpl3NP_001003444.1 L_HGMIC_fpl 22..199 CDD:287244 44/190 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4026
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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