DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3770 and lhfpl2a

DIOPT Version :10

Sequence 1:NP_611985.2 Gene:CG3770 / 37991 FlyBaseID:FBgn0035085 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_991226.1 Gene:lhfpl2a / 402962 ZFINID:ZDB-GENE-040426-1839 Length:225 Species:Danio rerio


Alignment Length:233 Identity:73/233 - (31%)
Similarity:119/233 - (51%) Gaps:24/233 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MCYVIITIASLVWFLCSLVADMLFAVALVTPRWLVGPAQGTD--------STASSHHQSSVGIYT 57
            ||:||:|..|::|.|.|:||.....:|.::..||||..:..|        :.|...::.::|||.
Zfish     1 MCHVIVTCRSMLWTLLSIVAAFSELIAFLSTDWLVGFPRAPDAGFSPLGATAAGEAYRPTLGIYG 65

  Fly    58 RC-KVMQ-EGGFQCGRFDLDGLATDSSVYPNE-----WKAAMFFVMLGFSLLSVTVILTLITCCR 115
            || :|.. ..|..||.:         :|:..|     |:|...|:..|..||.....:::.|.|.
Zfish    66 RCIRVPHYRRGVLCGPY---------AVHFGEIASGFWQATAIFLAAGILLLCAVAFISIFTMCF 121

  Fly   116 QSACGKSIHNMTACAQVVAGICMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGI 180
            ||...|||.|:....|.:||:.:::||.|:|.||.:.::|..||.|:.|:....||.|.:||..:
Zfish   122 QSIMKKSIFNVCGLLQAIAGLFLIVGLVLYPAGWGSQKVQLYCGPDSSPYRLGLCSAGWAFYTAL 186

  Fly   181 IGVLLTFTAAGISLKAESSNMRTRVRRRVEAGSKLVCI 218
            .|.:|.|..|..|.:||.:....:|:..::.|..|:|:
Zfish   187 AGTVLCFLCAVFSAQAEIATSSDKVQEEIQEGKSLICL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3770NP_611985.2 L_HMGIC_fpl 10..195 CDD:463019 62/199 (31%)
lhfpl2aNP_991226.1 L_HMGIC_fpl 9..201 CDD:463019 62/200 (31%)

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