DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3770 and Lhfpl5

DIOPT Version :9

Sequence 1:NP_001286864.1 Gene:CG3770 / 37991 FlyBaseID:FBgn0035085 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_006524496.1 Gene:Lhfpl5 / 328789 MGIID:1915382 Length:249 Species:Mus musculus


Alignment Length:191 Identity:41/191 - (21%)
Similarity:85/191 - (44%) Gaps:33/191 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LVWFLCSLVADMLFAVALVTPRWLVGPAQGTDSTASSHHQSSVGIYTRC-------KVMQEGGFQ 68
            ::|...::...:|.....:.|.|:       ..:.|:......|:::.|       :::.:||  
Mouse    27 VMWGTLTICFSVLVMALFIQPYWI-------GDSVSTPQAGYFGLFSYCVGNVLSSELICKGG-- 82

  Fly    69 CGRFDLDGLATDSSVYPNEWKAAMFFVMLG-FSLLSVTVILTLITCCRQSACGKSIHNMTACAQV 132
                .||    .||:....:|.|||||.|. |.::...:..:|...|..:    :::.:.|..|:
Mouse    83 ----PLD----FSSIPSRAFKTAMFFVALAMFLIIGSIICFSLFFVCNTA----TVYKICAWMQL 135

  Fly   133 VAGICMMLGLFLHPMGWRANRIQRLCGMDAEPFYPADCSIGVSFYCGIIGV----LLTFTA 189
            .|...:|:|..::|.||.::.::|:||.....:....|:|..:|...|:.:    :|:|.|
Mouse   136 AAATGLMIGCLVYPDGWDSSEVRRMCGEQTGKYTLGHCTIRWAFMLAILSIGDALILSFLA 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3770NP_001286864.1 L_HGMIC_fpl 10..195 CDD:287244 41/191 (21%)
Lhfpl5XP_006524496.1 L_HMGIC_fpl 25..202 CDD:370913 41/191 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4026
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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